DRSC/TRiP Functional Genomics Resources

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Protein Alignment zf30C and CG4424

DIOPT Version :10

Sequence 1:NP_477301.1 Gene:zf30C / 34292 FlyBaseID:FBgn0270924 Length:777 Species:Drosophila melanogaster
Sequence 2:NP_650859.3 Gene:CG4424 / 42390 FlyBaseID:FBgn0038765 Length:345 Species:Drosophila melanogaster


Alignment Length:117 Identity:44/117 - (37%)
Similarity:62/117 - (52%) Gaps:4/117 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   572 LYGCSVCGKHLSTAGILKTHMLLHKADTPYQCDKCGKTFKVKAQYKSHLKTRHTDYKPYKCHLCP 636
            |:.|::||........|.|||..|..:.||:|:.|.|:|.|..|.|.|:: :||..|||.|..|.
  Fly   186 LHVCAICGNGYPRKSTLDTHMRRHNDERPYECEICHKSFHVNYQLKRHIR-QHTGAKPYTCQYCQ 249

  Fly   637 KEYPYRESLLTHMTVHTGIKRFLCNNCGKRFTCISNLQAHRKVHADTCGQLP 688
            :.:..|.||:.|...|...:.:.|..|||:||..|.|:.|.|.|.   |:.|
  Fly   250 RNFADRTSLVKHERTHRNERPYACKTCGKKFTYASVLKMHYKTHT---GEKP 298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zf30CNP_477301.1 C2H2 Zn finger 33..53 CDD:275368
C2H2 Zn finger 61..82 CDD:275368
C2H2 Zn finger 98..117 CDD:275368
C2H2 Zn finger 134..152 CDD:275368
C2H2 Zn finger 511..532 CDD:275370
COG5048 <523..>672 CDD:227381 37/99 (37%)
C2H2 Zn finger 546..566 CDD:275368
C2H2 Zn finger 575..595 CDD:275368 7/19 (37%)
C2H2 Zn finger 603..624 CDD:275368 8/20 (40%)
C2H2 Zn finger 632..652 CDD:275368 6/19 (32%)
C2H2 Zn finger 660..680 CDD:275368 10/19 (53%)
CG4424NP_650859.3 zf-AD 10..92 CDD:462262
C2H2 Zn finger 189..209 CDD:275368 7/19 (37%)
COG5048 210..>345 CDD:227381 35/93 (38%)
C2H2 Zn finger 217..237 CDD:275368 8/20 (40%)
C2H2 Zn finger 245..265 CDD:275368 6/19 (32%)
C2H2 Zn finger 273..293 CDD:275368 10/19 (53%)
C2H2 Zn finger 301..320 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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