DRSC/TRiP Functional Genomics Resources

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Protein Alignment zf30C and CG18476

DIOPT Version :10

Sequence 1:NP_477301.1 Gene:zf30C / 34292 FlyBaseID:FBgn0270924 Length:777 Species:Drosophila melanogaster
Sequence 2:NP_731615.1 Gene:CG18476 / 41404 FlyBaseID:FBgn0037931 Length:936 Species:Drosophila melanogaster


Alignment Length:956 Identity:182/956 - (19%)
Similarity:286/956 - (29%) Gaps:362/956 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 LVEITTDG-----IPKLHCPVCNKALVSLAGYVKHVKKHQPPGGFECRHCDARFCHEEELTQHAK 79
            |.||..|.     .|:..|..|.|.|:....|||..                 ....|.|.:|.|
  Fly    40 LTEINLDATGSQKFPQCLCSGCTKKLMGAYCYVKQA-----------------MAANELLMKHLK 87

  Fly    80 DEHGVTGAVAGQERKPFVCEKCGAEYKYQEAYRRHCRTKCGE-------EKLPREESRPMECKCC 137
            :....|.....||....:|.:...|.|.:..     ...|||       .:||..:...||.|..
  Fly    88 NGAAPTSTDCLQEAPMELCAEQHVEVKLETE-----DEDCGENDVTITCSELPEPDETDMESKKS 147

  Fly   138 YTRFSSASNLSKHRRSRPDTCGQPEYDSPGSSDGMKKHKAFRKKDRNRDSDDEDTTSEESEDSDD 202
            ....:....:.  ....|.:..:|.||.|                         |:..|.|||.|
  Fly   148 VDPLTMIETVK--LEMEPRSVEKPAYDDP-------------------------TSDFEDEDSLD 185

  Fly   203 DIPLASRLKTKLKQESQNSDSGDECP------DF---------EPNNSEDDADASGFQLPPPAMV 252
            ::||.:|:: |.|...::.....:||      ||         :|.....|..           :
  Fly   186 NLPLYNRIQ-KWKTGRKSVYKCHDCPRSFKRFDFLKRHEMRVHKPETRLYDCS-----------L 238

  Fly   253 KVEAFDEEDFEYQDASMYV---KTESTDIFSNEKDKLLDVLLNEGDGLKPFESL-------KVEQ 307
            .:..|...  |..:|.:.:   ...|.:|..::|.|.:|:.|.:..|.|..|.:       |:..
  Fly   239 CIRKFSRS--EALEAHLKIHRNSKRSANISEHKKAKAVDLNLCKPHGYKLIECMICQSQYNKIAD 301

  Fly   308 GAGILDE------IAAVPLVE--------------VAEEDVLEL-------------------RG 333
            ....|:|      :...|.:|              ::||.::.|                   .|
  Fly   302 LRRHLEEHPDIVSLCGRPNMEPHELAELFYPDSKDLSEEQLINLIRKDLAAGIYQRFYSITNQSG 366

  Fly   334 HQMEKPPGP---------------RKRGRPP-------KEKIPVVKRKYRKRNAPR-----SPSP 371
            ::|:.....               ||:.|..       ::|.|   |||:..:..|     |.:|
  Fly   367 YEMDLDSSETDSDLDGDHDDQHKRRKKSRKATYSCELCQQKFP---RKYQLYDHQRQSHSWSDAP 428

  Fly   372 DDSSGTPKRVAKIS----------------------------KKELKERLKMINKMEKSWKCPHC 408
            ........|...:.                            |..||...:......::::|..|
  Fly   429 HVCGRCDGRFVSLQLLRHHNESQCRNAQKRFLCHKCPLRFRWKHNLKTHFREHRITNQTFECSEC 493

  Fly   409 VKIY--------HI-----------------RKPYE-----KHLRDDHKLNEAEMK--------- 434
            .:::        |:                 ||.|.     |||: .|.|.|.::.         
  Fly   494 KRVFDKKKSLTVHLLSVHAEESKLIPCQWCSRKFYRHDYLVKHLK-RHGLKEHDIPLAETLIAAT 557

  Fly   435 ------------------EIFKDVDVHAKL-------------------------------DEE- 449
                              |...|:..|.:|                               |.| 
  Fly   558 SRPNGAKRITCRMCNLHFERIVDLRAHIQLELKLSLSLHQSYDSPHNYSITNESGFELQLEDSET 622

  Fly   450 ------------VFKCPICS-----KIYLVEKRLVTHM--KVHGEDGKLTFKC------------ 483
                        |:.|.:||     |..:::.:...|.  |:..|.....|||            
  Fly   623 EDEMQPGVGSRPVYICELCSVQCKRKFEMIQHQRTMHRFDKMPHECDDCIFKCVSKSIMDHHRQG 687

  Fly   484 ---------PC-YCNLFFATKEQATEHARAQHKE----------------------------LLY 510
                     .| .|:..|...|...:|...||.:                            ||.
  Fly   688 QCSSTEKKHACGKCSYKFMWPENLEQHILLQHSKSSVSNPTGDRHTQGTGDLEKDATEDGIPLLQ 752

  Fly   511 CEKCDKYMTGHDSLKNHERNFHSKKEPRSQQ--RNLICDKCGKKFTGRTSLSDHVRSDCGRLPLY 573
            |..||:.......|.||.|:.|...:.:.::  :..:|..||.:.....:|..|:|...|..| :
  Fly   753 CPHCDRTYQMKSRLNNHIRDVHINGDRKRKEAIKRFLCSLCGMETRSAAALVTHMRRHTGEKP-F 816

  Fly   574 GCSVCGKHLSTAGILKTHMLLHKADTPYQCDKCGKTFKVKAQYKSHLKTRHTDYKPYKCHLCPKE 638
            .|.:|.........|.:|..:|..:.|:.|..|||.|....:.|.|:.| |:..||:||..|.|.
  Fly   817 KCDLCEMAFPRHSELASHRRMHTGEKPFHCTVCGKDFARSDKLKRHMLT-HSGLKPHKCTYCEKS 880

  Fly   639 YPYRESLLTHMTVHTGIKRFLCNNCGKRFTCISNLQAHR--KVHAD 682
            |...:.|..|:..|||...|:|..||:||...|.|:.||  :.|.|
  Fly   881 YRQAKDLKLHLQQHTGECPFVCGTCGERFIQSSTLEKHRLMRRHFD 926

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zf30CNP_477301.1 C2H2 Zn finger 33..53 CDD:275368 7/19 (37%)
C2H2 Zn finger 61..82 CDD:275368 4/20 (20%)
C2H2 Zn finger 98..117 CDD:275368 3/18 (17%)
C2H2 Zn finger 134..152 CDD:275368 1/17 (6%)
C2H2 Zn finger 511..532 CDD:275370 7/20 (35%)
COG5048 <523..>672 CDD:227381 46/150 (31%)
C2H2 Zn finger 546..566 CDD:275368 6/19 (32%)
C2H2 Zn finger 575..595 CDD:275368 4/19 (21%)
C2H2 Zn finger 603..624 CDD:275368 8/20 (40%)
C2H2 Zn finger 632..652 CDD:275368 6/19 (32%)
C2H2 Zn finger 660..680 CDD:275368 9/21 (43%)
CG18476NP_731615.1 C2H2 Zn finger 206..227 CDD:275368 4/20 (20%)
C2H2 Zn finger 236..256 CDD:275368 3/32 (9%)
C2H2 Zn finger 401..422 CDD:275368 6/23 (26%)
C2H2 Zn finger 431..447 CDD:275368 1/15 (7%)
C2H2 Zn finger 461..481 CDD:275368 3/19 (16%)
C2H2 Zn finger 490..511 CDD:275368 3/20 (15%)
C2H2 Zn finger 520..540 CDD:275368 6/20 (30%)
C2H2 Zn finger 638..659 CDD:275368 4/20 (20%)
C2H2 Zn finger 668..690 CDD:275368 3/21 (14%)
C2H2 Zn finger 698..715 CDD:275368 4/16 (25%)
C2H2 Zn finger 753..774 CDD:275368 7/20 (35%)
C2H2 Zn finger 790..810 CDD:275368 6/19 (32%)
COG5048 814..>886 CDD:227381 23/73 (32%)
C2H2 Zn finger 818..838 CDD:275368 4/19 (21%)
C2H2 Zn finger 846..866 CDD:275368 8/20 (40%)
C2H2 Zn finger 874..894 CDD:275368 6/19 (32%)
C2H2 Zn finger 902..924 CDD:275368 9/21 (43%)

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