DRSC/TRiP Functional Genomics Resources

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Protein Alignment zf30C and Neu2

DIOPT Version :10

Sequence 1:NP_477301.1 Gene:zf30C / 34292 FlyBaseID:FBgn0270924 Length:777 Species:Drosophila melanogaster
Sequence 2:NP_649316.1 Gene:Neu2 / 40375 FlyBaseID:FBgn0037085 Length:382 Species:Drosophila melanogaster


Alignment Length:386 Identity:86/386 - (22%)
Similarity:136/386 - (35%) Gaps:118/386 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   327 DVLEL--RGHQMEKPPGPRKRGRPPKEKIPVVKRKYR-KRNAPRSPSPDDSSGTPKRVAKISKKE 388
            |::|.  |.||.                       || .::.....|.:|.||..:.| :.::::
  Fly    50 DIIETYERSHQF-----------------------YRFLKDVREEESENDGSGCSEEV-EAAERD 90

  Fly   389 LKERLKMIN--------------KMEKSWKCPHCVKIYHIRKPYEKHLRDDHKLNEAEMKEIFKD 439
            |::....::              |.:..:.|.||.|.:.::...:.|:|                
  Fly    91 LQDGADDVDSGNEPDINECDIKAKEKPGFSCSHCPKSFQVKSNLKVHMR---------------- 139

  Fly   440 VDVHAKLDEEVFKCPICSKIYLVEKRLVTHMKVHGEDGKLTFKCPCYCNLFFAT----KEQATEH 500
                :...|..|.|.:|.|.:.....|..||:.|  .|:..|:| .:|...|..    |.....|
  Fly   140 ----SHTGERPFTCSLCPKSFGYSSGLQNHMRTH--TGERPFQC-SHCPRSFTAGHHLKAHIQMH 197

  Fly   501 ARAQHKELLYCEKCDKYMTGHDSLKNHERNFHSKKEPRSQQRNLICDKCGKKFTGRTSLSDHVRS 565
            .|.......||:||  ::|.. .||.|       ....:.:....|.:|.|.|.....|..|:|.
  Fly   198 ERRGSLRCPYCQKC--FLTSL-ILKQH-------LATHTDETQFKCSQCSKSFQVEHELWMHMRV 252

  Fly   566 DCGRLPLYGCSVCGKHLSTAGILKTHM------------LLHKA---DTPYQCDKCGKTFKVKAQ 615
            ...|  |:.|..|.|..:....||.|:            ..||.   ....:|.||.|||..::.
  Fly   253 HQER--LFTCGHCSKDFALHAYLKRHLSRNARCSQSSKASAHKTLGHSKALKCGKCPKTFTDRSA 315

  Fly   616 YKSHLKTRHT----------------------DYKPYKCHLCPKEYPYRESLLTHMTVHTG 654
            ..:|||: ||                      ..||:||..||:.:..:.:||||:..|||
  Fly   316 LSTHLKS-HTKNKPLLEGPCKSSGSKPAHSNAQRKPFKCSSCPRTFSRKSALLTHLQTHTG 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zf30CNP_477301.1 C2H2 Zn finger 33..53 CDD:275368
C2H2 Zn finger 61..82 CDD:275368
C2H2 Zn finger 98..117 CDD:275368
C2H2 Zn finger 134..152 CDD:275368
C2H2 Zn finger 511..532 CDD:275370 7/20 (35%)
COG5048 <523..>672 CDD:227381 44/169 (26%)
C2H2 Zn finger 546..566 CDD:275368 7/19 (37%)
C2H2 Zn finger 575..595 CDD:275368 6/31 (19%)
C2H2 Zn finger 603..624 CDD:275368 9/20 (45%)
C2H2 Zn finger 632..652 CDD:275368 7/19 (37%)
C2H2 Zn finger 660..680 CDD:275368
Neu2NP_649316.1 zf-AD 1..63 CDD:462262 5/35 (14%)
COG5048 <119..241 CDD:227381 34/154 (22%)
C2H2 Zn finger 121..141 CDD:275368 6/39 (15%)
zf-H2C2_2 133..156 CDD:463886 7/42 (17%)
C2H2 Zn finger 149..169 CDD:275368 6/19 (32%)
zf-H2C2_2 162..185 CDD:463886 8/25 (32%)
C2H2 Zn finger 177..197 CDD:275368 4/20 (20%)
C2H2 Zn finger 205..225 CDD:275368 8/29 (28%)
zf-C2H2_8 206..286 CDD:464935 23/91 (25%)
C2H2 Zn finger 233..253 CDD:275368 7/19 (37%)
C2H2 Zn finger 260..297 CDD:275368 8/36 (22%)
C2H2 Zn finger 303..323 CDD:275368 9/20 (45%)
C2H2 Zn finger 353..373 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.

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