DRSC/TRiP Functional Genomics Resources

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Protein Alignment zf30C and CG10543

DIOPT Version :10

Sequence 1:NP_477301.1 Gene:zf30C / 34292 FlyBaseID:FBgn0270924 Length:777 Species:Drosophila melanogaster
Sequence 2:NP_001369100.1 Gene:CG10543 / 37379 FlyBaseID:FBgn0034570 Length:1666 Species:Drosophila melanogaster


Alignment Length:375 Identity:86/375 - (22%)
Similarity:133/375 - (35%) Gaps:102/375 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   444 AKLDEEVFKCPICSKIYLVEKRLVTHMKVHGEDGKLTFKCPCYC--------NLFFATKEQATEH 500
            :|.|:..:.|.:|.|.|...|.|:.|.|:|          |.||        |    |.|:...|
  Fly   718 SKKDKPSYNCLLCPKSYRKRKSLLDHYKMH----------PGYCHDCGQRNGN----TLEEIIHH 768

  Fly   501 ARAQH-KELLY-CEKCDKYMTGHDSLKNHERNFHSKKEPRS----------QQRNL--------- 544
            .|..| ||..: ||.|.:..:.......|..: |:|||.::          .|:.|         
  Fly   769 NRTMHVKEFPFVCETCGESYSRKQQFHAHVES-HNKKEIKTFPCGECGLKFPQKKLQQHFEETGH 832

  Fly   545 -----ICDKCGKKFTGRTSLSDHVRSDCGRLPLYGCSVCGKHLSTAGILKTHMLLH-KADTPYQC 603
                 ||:.||::|..:.:|..|:.....|...:.|.:|....:....|:.|:.|| :...||.|
  Fly   833 KADGAICEVCGEEFQSKNALYQHIIRVHKRDNFFECHICHNRFTLKANLERHVQLHTEIKRPYVC 897

  Fly   604 DKCGKTFKVKAQYKSHLKTRHTDYKPYKCHLCPKEYPYRESLLTHMTVHTGIKRFLCNNCGKRFT 668
            |.||.::......|.|....|.|....||.||.|.:...:||..|:..|:..:...||.|.:.|.
  Fly   898 DLCGSSYFTYPALKEHYSNAHVDVSECKCTLCGKRFGSAKSLQRHLPSHSEERPHCCNYCDQTFK 962

  Fly   669 CISNLQAHR-------------------KVHADTCGQL-----PLNAKATQYMGVQRGKLLMGAK 709
            ..::|..|:                   |...:..|.|     |...||::.....:.|....|.
  Fly   963 WKTHLVRHKQTMHGNEPPPPKKGKQRFPKTSEEDMGSLPDMPGPPPVKASKKAATSKAKAQAAAA 1027

  Fly   710 PEAGMEYEETKTLIAQDVIDRDMPMAQELNFPSDGSA-------PLATVP 752
            ..|....::.:                     ..|||       |::|.|
  Fly  1028 AAAAASSQQQQ---------------------QKGSAATPTPPPPVSTTP 1056

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zf30CNP_477301.1 C2H2 Zn finger 33..53 CDD:275368
C2H2 Zn finger 61..82 CDD:275368
C2H2 Zn finger 98..117 CDD:275368
C2H2 Zn finger 134..152 CDD:275368
C2H2 Zn finger 511..532 CDD:275370 4/20 (20%)
COG5048 <523..>672 CDD:227381 44/173 (25%)
C2H2 Zn finger 546..566 CDD:275368 6/19 (32%)
C2H2 Zn finger 575..595 CDD:275368 4/19 (21%)
C2H2 Zn finger 603..624 CDD:275368 6/20 (30%)
C2H2 Zn finger 632..652 CDD:275368 7/19 (37%)
C2H2 Zn finger 660..680 CDD:275368 7/38 (18%)
CG10543NP_001369100.1 C2H2 Zn finger 727..747 CDD:275368 8/19 (42%)
C2H2 Zn finger 751..773 CDD:275368 6/25 (24%)
C2H2 Zn finger 781..801 CDD:275368 4/20 (20%)
PHA00733 <804..860 CDD:177301 11/55 (20%)
C2H2 Zn finger 811..827 CDD:275368 2/15 (13%)
C2H2 Zn finger 839..860 CDD:275368 6/20 (30%)
C2H2 Zn finger 868..888 CDD:275368 4/19 (21%)
C2H2 Zn finger 897..913 CDD:275368 5/15 (33%)
C2H2 Zn finger 926..946 CDD:275368 7/19 (37%)
KREPA <944..>1009 CDD:483960 11/64 (17%)
C2H2 Zn finger 954..975 CDD:275368 6/20 (30%)
Blue background indicates that the domain is not in the aligned region.

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