DRSC/TRiP Functional Genomics Resources

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Protein Alignment zf30C and CG12942

DIOPT Version :9

Sequence 1:NP_477301.1 Gene:zf30C / 34292 FlyBaseID:FBgn0270924 Length:777 Species:Drosophila melanogaster
Sequence 2:NP_610628.2 Gene:CG12942 / 36158 FlyBaseID:FBgn0033569 Length:686 Species:Drosophila melanogaster


Alignment Length:635 Identity:134/635 - (21%)
Similarity:210/635 - (33%) Gaps:179/635 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 PME-C-KCC--------YTRFSSASNLSKHRRSRPDTCGQPEYDSPGSSDGMKKHKAFRKKDRNR 185
            ||: | :||        :...:..|||.....::......|        .|..|.||        
  Fly    71 PMQICVRCCRALEVAMHFVEMALESNLKLQAEAKSVKLPSP--------TGELKRKA-------- 119

  Fly   186 DSDDEDTTSEESEDSDDDIPLASRLKTKLKQESQNSDSGDECPDFEPN--------NSEDDADAS 242
                          |::.||.     .:..||.:....|.|.| .|.|        ....|.|||
  Fly   120 --------------SNETIPW-----NQFSQEFEQFVEGYEGP-IEENVLYMRGTKVPRLDVDAS 164

  Fly   243 GFQLPPPAMVKVEAFDEEDFEYQDASMYVKTESTDIFSNEKDKLLDVLLNEGDGLKPFESL---K 304
            ......|...:|..||            ||.::.|:  .|:|:      |:|...|..|:.   .
  Fly   165 SSSETAPKEDEVILFD------------VKYDTNDL--EEEDE------NDGSDAKNNETFFENS 209

  Fly   305 VEQGAGILDEIAAVPLVEVAEEDVLELRGHQMEKPPGPRKRGRPPKEKIPVVKRKYRKRNAPRSP 369
            :..|..::       :|.|||:.|.....:...     .|.|....|:..:::|...     .:.
  Fly   210 ITPGESVM-------VVSVAEKAVENNNNYNFN-----NKNGDVTDEECDLIQRALE-----MTL 257

  Fly   370 SPDDSSGTPKRVAKISKKELKERLKMINKMEKS-------------------WKCPHCVKIYHIR 415
            :.|..|.:||..|. ::.:||.     |.:|.|                   .||..|...:...
  Fly   258 NDDGCSQSPKNEAS-NETQLKS-----NGIEVSSPLFIKLATTSSTTGNIPILKCNICQYTHTDA 316

  Fly   416 KPYEKHLRDDHKLNEAEMKEIFKDVDVHAKLDEEVFKCPICSKIYL-----VEKRLVTHMKVHGE 475
            :..:.|.:..||::..|       .|:......:.|||..|:....     ::|.|:.|.|:.|:
  Fly   317 EQLKIHYKSIHKISMME-------DDIIGLNKNQNFKCRPCNSYETKDRSEMQKHLIDHHKIDGD 374

  Fly   476 DGKLTFKCPCY-------CNLFFATKEQATEHARAQH---------KELLYCEKCDKYMTGHDSL 524
                 |:..||       |:..|..:..|.:|....|         .|...|..|||......||
  Fly   375 -----FEMYCYMQANCPACDRIFKDQRSARKHYTRVHTPVQIAVSPTESYACTACDKVFNQKASL 434

  Fly   525 KNHER---------------NFHS--KKEPRSQQRNLI-----CDKCGKKFTGRTSLSDHVRSDC 567
            .:|:|               .|:|  |.|...||.:.:     |:.|.:.|....:|:.|.:...
  Fly   435 HSHQRFCQVKDVVHCSFCDQQFNSMRKYELHLQQLHAVETVHECEICRRSFKSAETLTMHRKRHS 499

  Fly   568 GRLPLYGCSVCGKHLSTAGILKTHM-LLHKADTPYQCDKCGKTFKVKAQYKSHLKTRHTDYKPYK 631
            .|  .|.|..|..:...:..|:.|. ..|..:.|..|..||..|:.....:.|.:..|...|.::
  Fly   500 ER--HYQCGKCSLNYVNSAELRVHYERAHVNEEPVSCLTCGNQFQNMTLLREHEQRSHQKSKVWR 562

  Fly   632 CHLCPKEYPYRESLLTHMTVHTGIKRFLCNNCGKRFTCISNLQAH-RKVH 680
            |.:|..|...|.....|...|.... :.|..|...|...|..:.| :|||
  Fly   563 CEVCNFETKTRWRRRQHQYEHMDYP-YKCQKCTSEFADRSKFRQHSKKVH 611

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zf30CNP_477301.1 C2H2 Zn finger 33..53 CDD:275368
C2H2 Zn finger 61..82 CDD:275368
C2H2 Zn finger 98..117 CDD:275368
C2H2 Zn finger 134..152 CDD:275368 6/26 (23%)
C2H2 Zn finger 511..532 CDD:275370 8/35 (23%)
COG5048 <523..>672 CDD:227381 39/171 (23%)
C2H2 Zn finger 546..566 CDD:275368 5/19 (26%)
C2H2 Zn finger 575..595 CDD:275368 4/20 (20%)
C2H2 Zn finger 603..624 CDD:275368 5/20 (25%)
C2H2 Zn finger 632..652 CDD:275368 5/19 (26%)
C2H2 Zn finger 660..680 CDD:275368 6/20 (30%)
CG12942NP_610628.2 zf-AD 22..101 CDD:285071 8/29 (28%)
C2H2 Zn finger 385..406 CDD:275368 4/20 (20%)
C2H2 Zn finger 421..470 CDD:275368 14/48 (29%)
C2H2 Zn finger 449..466 CDD:275371 4/16 (25%)
C2H2 Zn finger 478..498 CDD:275368 5/19 (26%)
C2H2 Zn finger 505..526 CDD:275368 4/20 (20%)
C2H2 Zn finger 534..555 CDD:275368 5/20 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45440068
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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