DRSC/TRiP Functional Genomics Resources

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Protein Alignment zf30C and CG30020

DIOPT Version :10

Sequence 1:NP_477301.1 Gene:zf30C / 34292 FlyBaseID:FBgn0270924 Length:777 Species:Drosophila melanogaster
Sequence 2:NP_610627.2 Gene:CG30020 / 36156 FlyBaseID:FBgn0050020 Length:1309 Species:Drosophila melanogaster


Alignment Length:1017 Identity:186/1017 - (18%)
Similarity:297/1017 - (29%) Gaps:389/1017 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 IPKLHCPVCNKALVSLAGYVKHVKKHQPPGGFECRHCDARFCHEEELTQHAK------DEHGVTG 86
            |.|..|..|.|...::|....|...|.....|.|..||.......:|.||.|      ||:|   
  Fly   364 IHKHKCKFCPKTFSTVARLKSHQLTHSNLPKFFCDQCDFYSLRSADLIQHYKMVHHRVDENG--- 425

  Fly    87 AVAGQERKPFVCEKCGAEYKYQEAYRRHCRTKCGEEKLPREESRPMECKCCYTRFSSASNLSKHR 151
                                           |.|:|:....|||...|..|....|:.|.|..|.
  Fly   426 -------------------------------KTGKEQAQGIESRVYSCDMCLFETSTVSQLRTHY 459

  Fly   152 RS-----------RPDTCGQP--------------------------EYDSPG------------ 167
            :.           ||...|:|                          :| .||            
  Fly   460 KERHTVQPTEVQLRPSWTGEPTTTRGVAAKQQTPAKILNHTDIPLGIKY-PPGVLETQAPLPQPV 523

  Fly   168 ----SSDGMKKHKAFRKKDRN-RDSDD------------------------------EDTTSEES 197
                ..|.|::.:........ .:|.|                              |:||...|
  Fly   524 VHQPMPDPMQQTEPMATTSTTITESGDINVVVDATPLFYAATSNSLLVTNPAPVTTVEETTGTAS 588

  Fly   198 --------EDSDDDIPLASRLKTKLKQESQNSDSGDECPDFEPNNSEDDADASGF-QLPPPAMVK 253
                    |.|:.::|:...::......|..|..|| ..||     .|:.|.:.. .:|...|..
  Fly   589 NHAFGIFPEISEGNLPVNEAVQQAPANSSSVSVFGD-MQDF-----IDNTDVAAICTIPADGMPV 647

  Fly   254 VEAFD--------EEDFEYQDASMYVKTESTDIFSNEKDKLLDVLLNEGDGLKPFESLKVEQGAG 310
            |:..|        ..||:.::.....:.|..|..::|:|:..:...|:.:.....::|       
  Fly   648 VDGDDIVIDNNNISLDFDAENLFEDFEEEEDDTVADEEDEADNEDENDNNDAATDQNL------- 705

  Fly   311 ILDEIAAVPLVEVAEEDVLELRGHQ---MEKP---------PGPRK--------RGRPPKE---- 351
                     |:...::||.:....|   ::||         ....|        ||..|..    
  Fly   706 ---------LLTSDDDDVDDFDDEQSKHLQKPYCIYCNKKFTSQYKFENHMFVHRGLAPYRCELC 761

  Fly   352 -KIPVVKR---KYRKRNAPRSPSPD--DSSGTPKRVAKISKKEL-KERLKMINKMEKSWKCP-HC 408
             .:..:||   |:.|....|.|:.|  .:.|....||:.:.::| ..|:|  |.|....||| .|
  Fly   762 TNLYNMKRLLIKHYKTVHKRMPTRDMVQAKGDKVSVARTNIEKLYPGRIK--NPMLMCAKCPFEC 824

  Fly   409 VKIYHIRKPYEKHLRDDHKLNEAEMKEIFKDVDVHAKLDEEVFKCPICSKIYLVEKRLVTHM-KV 472
            .....:|    |||...|.:|:. :.|...:|.:..||.   |:||.|.:.:..:..|..|: :.
  Fly   825 ESDSEMR----KHLNAHHGINDG-VSEHANEVFIIRKLP---FECPRCIRSFAAKTTLSRHLQRS 881

  Fly   473 HGEDGKLTFKCPCYCNLFFATKEQATEHAR-----------AQHKELLYCEKCDKYMTGHDSLKN 526
            |..|..:..:.| :|.....| ..||..:.           .||.|::..:...:.||  ::|.|
  Fly   882 HLVDTIIEMQTP-HCGEAITT-TMATSSSTISEPVNSVTVDGQHNEMMQTDVGAEKMT--EALGN 942

  Fly   527 HERNFHS--------KKEPRSQQRNL--------------------------------------- 544
            .:.|...        |.||...:..|                                       
  Fly   943 GDGNEEGGTDDGTGVKAEPAVPEEELDPVTLDAATAVTTTAIAAAISAAAAATATSLESPVATTA 1007

  Fly   545 ----------------------------------------------------------------- 544
                                                                             
  Fly  1008 SSSTTLFPTPTPFDFDYDIMRDEAQQSSPNIHDVSKALSDNASSSCPINESYKLLSTTALETSPA 1072

  Fly   545 ---------------ICDKCGKKFTGRTSLSDH--------VRSDCGRLPLYGCSVCGKHLSTAG 586
                           ||..|.:.|.....|..|        .||..|.  .:.|::|.....|..
  Fly  1073 KGLRSNSRLHRSSIHICKLCNQTFDELGKLVKHEMELHSNTERSRWGY--QHKCAICNTSYRTLT 1135

  Fly   587 ILKTHMLLHKADTPYQCDKCGKTFKVKAQYKSHLKTRHTDYKPYKCHL--CPKEYPYRESLLTHM 649
            :||.||..| ::...||..|.|:|...|:.:.|.|.:|:..|..:|.:  |.|.:.::..|:.|.
  Fly  1136 LLKFHMKRH-SNRKSQCKLCPKSFVTIAELERHTKAKHSKDKTLRCFMDGCRKTFAFKHHLIRHQ 1199

  Fly   650 TVHTGIKRFLCNNCGKRFTCISNLQAHRKVHADTCGQLPLNAKATQYMGVQRGKLLMGAKPEAGM 714
            .......|::|..|.|......:|:.|..||.   |::...........::||:|:         
  Fly  1200 KASHLSTRYICPVCNKEEKSNVHLKNHMSVHK---GEITYKCPKCDRSYLRRGRLV--------- 1252

  Fly   715 EYEETKTLIAQDVIDRDMPMAQELNFPSDGSAPLATVPLNYA 756
                |..||..|           |.|.::....|:::..|.|
  Fly  1253 ----THALIIHD-----------LRFTTEELGNLSSLATNQA 1279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zf30CNP_477301.1 C2H2 Zn finger 33..53 CDD:275368 5/19 (26%)
C2H2 Zn finger 61..82 CDD:275368 8/26 (31%)
C2H2 Zn finger 98..117 CDD:275368 0/18 (0%)
C2H2 Zn finger 134..152 CDD:275368 6/17 (35%)
C2H2 Zn finger 511..532 CDD:275370 5/20 (25%)
COG5048 <523..>672 CDD:227381 43/285 (15%)
C2H2 Zn finger 546..566 CDD:275368 6/27 (22%)
C2H2 Zn finger 575..595 CDD:275368 7/19 (37%)
C2H2 Zn finger 603..624 CDD:275368 7/20 (35%)
C2H2 Zn finger 632..652 CDD:275368 5/21 (24%)
C2H2 Zn finger 660..680 CDD:275368 5/19 (26%)
CG30020NP_610627.2 zf-AD 25..103 CDD:214871
C2H2 Zn finger 369..389 CDD:275368 5/19 (26%)
C2H2 Zn finger 397..418 CDD:275368 7/20 (35%)
C2H2 Zn finger 442..460 CDD:275368 6/17 (35%)
C2H2 Zn finger 730..750 CDD:275368 1/19 (5%)
C2H2 Zn finger 758..777 CDD:275368 3/18 (17%)
C2H2 Zn finger 1089..1110 CDD:275368 5/20 (25%)
C2H2 Zn finger 1124..1144 CDD:275368 7/19 (37%)
C2H2 Zn finger 1151..1172 CDD:275368 7/20 (35%)
C2H2 Zn finger 1180..1203 CDD:275368 5/22 (23%)
C2H2 Zn finger 1210..1230 CDD:275368 5/19 (26%)
C2H2 Zn finger 1238..1254 CDD:275368 3/28 (11%)
Blue background indicates that the domain is not in the aligned region.

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