DRSC/TRiP Functional Genomics Resources

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Protein Alignment zf30C and CG1529

DIOPT Version :9

Sequence 1:NP_477301.1 Gene:zf30C / 34292 FlyBaseID:FBgn0270924 Length:777 Species:Drosophila melanogaster
Sequence 2:NP_001138223.2 Gene:CG1529 / 33077 FlyBaseID:FBgn0031144 Length:512 Species:Drosophila melanogaster


Alignment Length:361 Identity:73/361 - (20%)
Similarity:143/361 - (39%) Gaps:112/361 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   376 GTPKRVAKISKK------ELKERLKMINKMEKSWKCPHCVKIYHIR-KPYEKHLRDDHKLNEAEM 433
            |.|..:..:...      ||::..:..::....|: |..:.:..:: :|.::.|:::|:.||.|:
  Fly    49 GFPTEICNLCHNAVVYFDELRQVARESSQKLIGWQ-PVDIAVDRVKEEPPDEGLKENHEENEHEL 112

  Fly   434 KEIF------KDVDVHAKL-----------DEEV----------------------FKCPICSKI 459
            :|..      :.||:..|.           |||.                      ..|..|   
  Fly   113 EEEHEKQADGQQVDLSKKQEDQKKILDDREDEEYPDEYENSQQQLSQGTGSKRRAGLACDQC--- 174

  Fly   460 YLVEKRLVTHMKVHGEDGKLTFKCPCYCNLFFATKEQATEHARAQHK---ELLYCEKCDKYMTGH 521
                             ||..:|.|           ....|.|:.|:   :...|..|||..|.:
  Fly   175 -----------------GKQVYKLP-----------YLEAHIRSVHQGYSKPFLCRSCDKSFTRY 211

  Fly   522 DSLKNHERNFHSKKEPRSQQ-RNLICDKCGKKFTGRTSLSDHVRSDCGRLPLYGCSVCGKHLSTA 585
            :.|::|.||.|.:.|...|: |:|||:.|.::::.:.:|.:|::....|                
  Fly   212 EQLRSHMRNAHPQLEQLQQELRDLICELCNRQYSTKNALGEHLKRHAQR---------------- 260

  Fly   586 GILKTHMLLHKADTPYQCDKCGKTFKVKAQYKSHLKTRHTDYKPYKCHLCPKEYPYRESLLTHM- 649
               |.|:          |:.||.....:.:..:||:|.:..::.:||..||:.:.::.::..|: 
  Fly   261 ---KEHV----------CEHCGVAKVTRTELLTHLRTHNPTWERFKCEQCPQLFRHKSAISRHVR 312

  Fly   650 TVHTGIKRFLCNNCGKRFTCISNLQAHRKVHADTCG 685
            .||.|.:||.|.:|.|:|...::...|.::|.::.|
  Fly   313 VVHEGQRRFQCGHCEKKFGTHASQVRHERLHTESTG 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zf30CNP_477301.1 C2H2 Zn finger 33..53 CDD:275368
C2H2 Zn finger 61..82 CDD:275368
C2H2 Zn finger 98..117 CDD:275368
C2H2 Zn finger 134..152 CDD:275368
C2H2 Zn finger 511..532 CDD:275370 9/20 (45%)
COG5048 <523..>672 CDD:227381 37/150 (25%)
C2H2 Zn finger 546..566 CDD:275368 4/19 (21%)
C2H2 Zn finger 575..595 CDD:275368 2/19 (11%)
C2H2 Zn finger 603..624 CDD:275368 6/20 (30%)
C2H2 Zn finger 632..652 CDD:275368 4/20 (20%)
C2H2 Zn finger 660..680 CDD:275368 5/19 (26%)
CG1529NP_001138223.2 zf-AD 11..79 CDD:285071 4/29 (14%)
C2H2 Zn finger 171..192 CDD:275368 8/51 (16%)
zf-C2H2_2 201..>257 CDD:289522 19/55 (35%)
C2H2 Zn finger 201..222 CDD:275368 9/20 (45%)
C2H2 Zn finger 237..257 CDD:275368 4/19 (21%)
C2H2 Zn finger 265..285 CDD:275368 5/19 (26%)
zf-C2H2_8 268..349 CDD:292531 22/81 (27%)
C2H2 Zn finger 294..315 CDD:275368 4/20 (20%)
C2H2 Zn finger 323..343 CDD:275368 5/19 (26%)
C2H2 Zn finger 360..380 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24409
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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