DRSC/TRiP Functional Genomics Resources

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Protein Alignment zf30C and CG43347

DIOPT Version :9

Sequence 1:NP_477301.1 Gene:zf30C / 34292 FlyBaseID:FBgn0270924 Length:777 Species:Drosophila melanogaster
Sequence 2:NP_001138185.2 Gene:CG43347 / 31991 FlyBaseID:FBgn0263072 Length:2684 Species:Drosophila melanogaster


Alignment Length:648 Identity:132/648 - (20%)
Similarity:215/648 - (33%) Gaps:219/648 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   196 ESEDSDDDIP------------------LAS---------RLKTKLKQESQNS----------DS 223
            |.||.|:|.|                  .||         |.|::..::||.:          :|
  Fly   814 EEEDEDEDQPPHPHLLPVLPPADAVDGITASNGQAGNFHVRSKSQGSKKSQAAKAAAAAMMPPNS 878

  Fly   224 GDECPDFEP-----NNSEDDADASGFQLPPPAMVK--------VEAFDEEDFEYQDASMYVK--- 272
            .||..| ||     .|.|||.|..  :|...|:.:        ||..||.|..::......:   
  Fly   879 YDEHDD-EPGAGLGGNDEDDDDDE--ELDEEALAREMKMEQNFVEEEDEHDIAFRSHQSCRECSI 940

  Fly   273 ----------------TESTDIFSNEKDKLLDVLL------------------NEGDGLKPFESL 303
                            |::.|:....:.:.|:.|.                  :|.|.::..|.:
  Fly   941 AHDHKLCPLRNACGNVTDAVDLGEWIERRNLEALAKLKADAQRQAKRASGRQRHEDDDMEDMEDM 1005

  Fly   304 KVEQG-AGILDEIAAVPLVEVAEEDV-LELRGHQMEKPPGPRKRGRPPKEKI------------P 354
            .::.. :..|.|:...||:..||..| .|...|.:|    |...|...:.::            |
  Fly  1006 DMDMDESSQLSELETKPLITFAEASVPAEFELHNVE----PNVTGVFARTEVRAFTKLGPLIGQP 1066

  Fly   355 VVKRKYRK--------------------------------RNAPRSPSPDDSS----GTPKRVAK 383
            |...:.|:                                |....:||.::.:    ...::...
  Fly  1067 VQTGEVREGSDMKWIFEMCEAGADKSYLLCCDNPNASNWLRFVRPAPSYEERNVNLVSIDRQAYF 1131

  Fly   384 ISKKELKERLKMINKMEKSWKCPHCVKIYHIRKPYEK------HLRDDHKLNEAEMKEIFKDVDV 442
            :|.::|:      |.||..:....|..::. :|..||      :|:.:|.|.......:|.|..:
  Fly  1132 VSCRDLR------NGMELLYWSDDCNTMWR-KKHTEKTNCGGCNLKFEHPLYYRTHCSVFHDPSM 1189

  Fly   443 HAKLDEEVFKCPICSKIYLVEKRLVTHMKVHGEDGKLTFKCPCYCNLFFATKEQATEHARAQHKE 507
              .|....:.|.:|.:..|.:..::.| .....|||..::|. :|:.||.              .
  Fly  1190 --SLTIRKYHCKVCGEPVLGKDNIMKH-AAEKHDGKGAYQCQ-FCSKFFL--------------R 1236

  Fly   508 LLYCEKCDKYMTGHDSLKNHERNFHSKKEPRSQQRNLICDKCGKKFTGRTSLSDHVRSDCGRLPL 572
            |.|.|....|  |..|..|..|.              :||.||:||.....|..|::.       
  Fly  1237 LNYLEMHRTY--GCASNPNRSRP--------------VCDFCGRKFCQPQKLKAHIKR------- 1278

  Fly   573 YGCSVCGKHLSTAGILKTHMLLHKADTPYQCDKCGKTFKVKAQYKSHLKTRHT-DYKPYKCHLCP 636
                   .|...|.:|:          .:||..|.|....:|..:.|.|..|: :.....|..|.
  Fly  1279 -------MHSDMAEVLR----------DFQCKLCSKLLGSRAALQRHSKEVHSRNSTVVSCPRCQ 1326

  Fly   637 KEYPYRESLLTHMTVHTGIKRFLC--NNCGKRFTCISNLQAH-RKVHADTCGQLPLNAKATQY 696
            |.:..|.:|..||..|:|::.|.|  ..|...||....||.| :|||..|..|:|...::..|
  Fly  1327 KLFQNRSNLKIHMLTHSGVRPFKCAEPECNAAFTTKQCLQFHYKKVHNYTQEQMPKIERSVAY 1389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zf30CNP_477301.1 C2H2 Zn finger 33..53 CDD:275368
C2H2 Zn finger 61..82 CDD:275368
C2H2 Zn finger 98..117 CDD:275368
C2H2 Zn finger 134..152 CDD:275368
C2H2 Zn finger 511..532 CDD:275370 6/20 (30%)
COG5048 <523..>672 CDD:227381 36/151 (24%)
C2H2 Zn finger 546..566 CDD:275368 8/19 (42%)
C2H2 Zn finger 575..595 CDD:275368 3/19 (16%)
C2H2 Zn finger 603..624 CDD:275368 6/20 (30%)
C2H2 Zn finger 632..652 CDD:275368 7/19 (37%)
C2H2 Zn finger 660..680 CDD:275368 8/22 (36%)
CG43347NP_001138185.2 NR_DBD_like 1198..>1268 CDD:295381 25/101 (25%)
C2H2 Zn finger 1198..1219 CDD:275368 4/21 (19%)
C2H2 Zn finger 1227..1255 CDD:275368 11/44 (25%)
C2H2 Zn finger 1259..1280 CDD:275368 8/34 (24%)
C2H2 Zn finger 1292..1313 CDD:275368 6/20 (30%)
C2H2 Zn finger 1322..1342 CDD:275368 7/19 (37%)
zf-H2C2_2 1334..1361 CDD:290200 9/26 (35%)
C2H2 Zn finger 1350..1373 CDD:275368 8/22 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24409
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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