DRSC/TRiP Functional Genomics Resources

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Protein Alignment zf30C and CG12219

DIOPT Version :9

Sequence 1:NP_477301.1 Gene:zf30C / 34292 FlyBaseID:FBgn0270924 Length:777 Species:Drosophila melanogaster
Sequence 2:NP_572312.1 Gene:CG12219 / 31572 FlyBaseID:FBgn0043796 Length:562 Species:Drosophila melanogaster


Alignment Length:677 Identity:121/677 - (17%)
Similarity:187/677 - (27%) Gaps:273/677 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 DGIPKLHCPVCNKALVSLAGYVKHVKKHQPP--GGFECRHCDARFCHEEELTQ----------HA 78
            |.|....|..|...|.|...:.|.|:..|..  ..|....||..:..:...||          .|
  Fly    60 DAISTCICTECCSQLESFHNFWKLVELKQTTLCSQFLAIDCDVNWSEDGSETQLDAQPQLLLEPA 124

  Fly    79 KDEHGVTGAVAGQERKPFVCEKCGAEYKYQEAYRRHCRTKCGEEKLPREESRPMECKCCYTRFSS 143
            ::...||...|.:    |.|..|...:|.:.....|..|..|:        ||:.|..|...|..
  Fly   125 EEPKVVTPTTANK----FPCMFCEKSFKMRRYLEEHIATHTGD--------RPIACPYCEMAFRC 177

  Fly   144 ASNLSKHRRSRPDTCGQPEYDSPGSSDGMKKHKAFRKKDRNRDSDDEDTTSEESEDSDDDIPLAS 208
            .||:..|.:|                    ||                ||              .
  Fly   178 RSNMYTHVKS--------------------KH----------------TT--------------Q 192

  Fly   209 RLKTKLKQESQNSDSGDECPDFEPNNSEDDADASGFQLPPPAMVKVEAFDEEDFEYQDASMYVKT 273
            .||.:.::::..|:.....|       |:.|.|....:|.||.....|         .||.    
  Fly   193 WLKAREERDAAKSNQNHTTP-------EETAPAVLVPVPAPAPALASA---------PASS---- 237

  Fly   274 ESTDIFSNEKDKLLDVLLNEGDGLKPFESLKVEQGAGILDEIAAVPLVEVAEEDVLELRGHQMEK 338
                             .:.|:.:.|..:......|.....:||.||                  
  Fly   238 -----------------ASPGNTVNPAATATPASSATPTTNLAAAPL------------------ 267

  Fly   339 PPGPRKRGRPPKEKIPVVKRKYRKRNA-----PRSPSPDDSSGTPKRVAKISKKELKERLKMINK 398
             |.|     |..:::|:...|.:...|     .::| |..|.|:..|.::               
  Fly   268 -PSP-----PTVQQLPLSVIKSQPSEAMNLTITKTP-PSGSRGSRNRSSR--------------- 310

  Fly   399 MEKSWKCPHCVKIYHIRKPYEKHLRDDHKLNEAEMKEIFKDVDVHAKLDEEVFKCPICSKIYLVE 463
                            ||.:     ...|:...|..::..:.....:|.|        :::.|..
  Fly   311 ----------------RKTH-----SPKKVQHTEGSDVSDEDSPQKRLKE--------NELILAN 346

  Fly   464 KRLVTHMKVHGEDGKLTFKCP----------CYCNLFFATKEQATEHARAQHKELLYC------- 511
            ...|....|..  ..||...|          |...|            :.||:|.|:.       
  Fly   347 YNAVAAAVVAA--ASLTGNPPGQPDSLQQRLCASLL------------QQQHQEQLFAVMSATAA 397

  Fly   512 --------EKCDKYMTGHDSLKNHERNFH----SKKEPRSQQR--------NLICDKCGKKFTGR 556
                    .......|...::..|....|    :.|.|.:..:        ::||          
  Fly   398 AAAAVGTSSATTTTTTTTGTMMAHPYGNHPPSETDKRPAAPLQAVIHAAPVSIIC---------- 452

  Fly   557 TSLSDHVRSDCGRLPLYGCSVCGKHLSTAGILKTHMLLHKADTPYQCDKCGKTFKVKAQYKSHLK 621
                    .:||.||       |::         |..|.|  ..|.||.|||:||:|...:.|..
  Fly   453 --------PNCGELP-------GQN---------HRCLSK--PKYACDVCGKSFKMKRYLEEHFA 491

  Fly   622 TRHTDYKPYKCHLCPKEYPYRESLLTH 648
            | ||..|.:.|..||.|:..:.::..|
  Fly   492 T-HTGVKLHTCAFCPTEFRSKSNMYHH 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zf30CNP_477301.1 C2H2 Zn finger 33..53 CDD:275368 6/19 (32%)
C2H2 Zn finger 61..82 CDD:275368 5/30 (17%)
C2H2 Zn finger 98..117 CDD:275368 4/18 (22%)
C2H2 Zn finger 134..152 CDD:275368 6/17 (35%)
C2H2 Zn finger 511..532 CDD:275370 2/35 (6%)
COG5048 <523..>672 CDD:227381 33/138 (24%)
C2H2 Zn finger 546..566 CDD:275368 1/19 (5%)
C2H2 Zn finger 575..595 CDD:275368 2/19 (11%)
C2H2 Zn finger 603..624 CDD:275368 10/20 (50%)
C2H2 Zn finger 632..652 CDD:275368 5/17 (29%)
C2H2 Zn finger 660..680 CDD:275368
CG12219NP_572312.1 zf-AD 2..94 CDD:285071 9/33 (27%)
C2H2 Zn finger 140..160 CDD:275368 4/19 (21%)
COG4049 149..204 CDD:226535 18/112 (16%)
C2H2 Zn finger 168..186 CDD:275368 6/17 (35%)
C2H2 Zn finger 473..493 CDD:275370 10/20 (50%)
C2H2 Zn finger 501..522 CDD:275370 5/17 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45455474
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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