DRSC/TRiP Functional Genomics Resources

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Protein Alignment zf30C and Opbp

DIOPT Version :9

Sequence 1:NP_477301.1 Gene:zf30C / 34292 FlyBaseID:FBgn0270924 Length:777 Species:Drosophila melanogaster
Sequence 2:NP_724479.1 Gene:Opbp / 246618 FlyBaseID:FBgn0050443 Length:562 Species:Drosophila melanogaster


Alignment Length:526 Identity:119/526 - (22%)
Similarity:204/526 - (38%) Gaps:117/526 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   223 SGDECPDFEPNNSEDDADASGFQLPPPAMVKVEAFDEEDFEYQDA--SMYVKTESTDIFSNEKDK 285
            |.::..:..||...:|.|.||..|            :::|.|.::  ::|..|||.|.....:..
  Fly     3 SSNQAEETTPNLHVEDGDLSGGAL------------QQEFLYCESCGNVYEDTESYDRAHGPQAG 55

  Fly   286 LLDVLLNEGDGLKPFESLKVEQGAGILDEI-AAVPLVEVAEEDVLELRGHQMEKPPGPRKR---- 345
            .......|.|.::......:.:..|..|.: |.|||.|:.||....::..:.:..|....|    
  Fly    56 CCTGASGELDFIEEVAEDCISEEVGEEDIVYADVPLWELVEEVPANVKAEKDQNEPSNSDRYFCY 120

  Fly   346 -------GRPPKEKIPVVKRKYRKRNAPRSPS-----PDDSSGTP--KRVAKISKKE-LKERLKM 395
                   .|          .|..:...||:.|     .|..:..|  :::|.:|.:. .::...:
  Fly   121 DCHSIFENR----------NKAEEHICPRAESGGSSQQDGDAKAPVRRKLASVSARTGPRDASSV 175

  Fly   396 INKMEKSWKCPHCVKIYHIRKPYEKHLRDDHKLNEAEMKEIFKD---VDVHAKLDE-EVFKCPIC 456
            |:       |..|..::...|..:.|:|    ::|....:..:|   :..|.:..| :.|.|.||
  Fly   176 IS-------CGICNTVFSSEKFLKFHMR----IHENRAPKSIQDALPIGAHQQYSELDQFYCEIC 229

  Fly   457 SKIYLVEKRLVTHMKVHGEDGKLTFKCPCYCNLFFAT------------KEQATEHAR--AQHKE 507
            :|.: .|..|..|.::|.::.. ...| ..||..|..            |.:.:|.:|  ||...
  Fly   230 NKSF-DETLLTVHKQMHQQESS-EIMC-SICNRKFENEVTYQMHQKIHEKPRDSESSRKLAQRTS 291

  Fly   508 L------LYCEKCDKYMTGHDSLKNHERNFHSKKEPRSQQRNLICDKCGKKFTGRTSLSDHVRSD 566
            |      ..|:.|::..|.......||| .|:.::|.:      |:.|||.|....||:.|:|:.
  Fly   292 LDKEKPGFPCQYCERVFTRPFEKVKHER-VHTGEKPYA------CEVCGKTFRVSYSLTLHLRTH 349

  Fly   567 CGRLPLYGCSVCGKHLSTAGILKTHMLLHKADTPYQCDKCGKTFKVKAQYKSHLKTRHTDYKPYK 631
            ....| |.|:||.|...:..:...|:.:|.::..:.||.|.|||:...|..:| |..||  |||:
  Fly   350 TNIRP-YVCTVCNKRFKSHQVYSHHLRIHSSERQFSCDACPKTFRTSVQLYAH-KNTHT--KPYR 410

  Fly   632 CHLCPKEYPYRESLLTHMTVHTGIK------------------------RFLCNNCGKRFTCISN 672
            |.:|.:.:....::..||..|..|.                        :|.||.||..:..:..
  Fly   411 CAVCNRPFSSMYAVKNHMQTHKEISSKGSVGSGTPNIKSAATSKSQAAGKFYCNTCGAEYARLFA 475

  Fly   673 LQAHRK 678
            |:.|.|
  Fly   476 LRLHMK 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zf30CNP_477301.1 C2H2 Zn finger 33..53 CDD:275368
C2H2 Zn finger 61..82 CDD:275368
C2H2 Zn finger 98..117 CDD:275368
C2H2 Zn finger 134..152 CDD:275368
C2H2 Zn finger 511..532 CDD:275370 6/20 (30%)
COG5048 <523..>672 CDD:227381 47/172 (27%)
C2H2 Zn finger 546..566 CDD:275368 9/19 (47%)
C2H2 Zn finger 575..595 CDD:275368 5/19 (26%)
C2H2 Zn finger 603..624 CDD:275368 9/20 (45%)
C2H2 Zn finger 632..652 CDD:275368 4/19 (21%)
C2H2 Zn finger 660..680 CDD:275368 7/19 (37%)
OpbpNP_724479.1 C2H2 Zn finger 254..274 CDD:275368 4/20 (20%)
C2H2 Zn finger 301..321 CDD:275368 6/20 (30%)
zf-H2C2_2 316..336 CDD:290200 9/26 (35%)
C2H2 Zn finger 329..349 CDD:275368 9/19 (47%)
zf-H2C2_2 341..366 CDD:290200 10/25 (40%)
C2H2 Zn finger 357..377 CDD:275368 5/19 (26%)
C2H2 Zn finger 385..405 CDD:275368 9/20 (45%)
C2H2 Zn finger 411..431 CDD:275368 4/19 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24409
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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