DRSC/TRiP Functional Genomics Resources

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Protein Alignment zf30C and sdz-38

DIOPT Version :10

Sequence 1:NP_477301.1 Gene:zf30C / 34292 FlyBaseID:FBgn0270924 Length:777 Species:Drosophila melanogaster
Sequence 2:NP_496158.1 Gene:sdz-38 / 191448 WormBaseID:WBGene00014131 Length:202 Species:Caenorhabditis elegans


Alignment Length:146 Identity:32/146 - (21%)
Similarity:50/146 - (34%) Gaps:39/146 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   486 YCNLFFATKEQATEHARAQHKE----LLYCEKCDKYMTGHDSLKNHERNFHSKKEPRSQQRNLIC 546
            ||.|.|:.....|.|....|.:    |:....|:......:|:|.|.::.|...:.:|      |
 Worm    16 YCQLTFSQTGSMTRHRDRLHTKNHTCLICVSNCEGAPILGESIKKHLQHAHGYVDVQS------C 74

  Fly   547 DKCGKKFTGRTSLSDHVRSDCGRLPLYGCSVCGK---------------HLSTAGILKTHMLLHK 596
            ..|...|..:..|..|         |......|:               .||.|.||::     |
 Worm    75 SCCHWIFENKIQLRTH---------LDAMKATGQPGDEVVLAKGTFAPGTLSQAAILQS-----K 125

  Fly   597 ADTPYQCDKCGKTFKV 612
            |.:..:..||.::.||
 Worm   126 AYSANRQQKCQQSLKV 141

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zf30CNP_477301.1 C2H2 Zn finger 33..53 CDD:275368
C2H2 Zn finger 61..82 CDD:275368
C2H2 Zn finger 98..117 CDD:275368
C2H2 Zn finger 134..152 CDD:275368
C2H2 Zn finger 511..532 CDD:275370 4/20 (20%)
COG5048 <523..>672 CDD:227381 23/105 (22%)
C2H2 Zn finger 546..566 CDD:275368 5/19 (26%)
C2H2 Zn finger 575..595 CDD:275368 6/34 (18%)
C2H2 Zn finger 603..624 CDD:275368 4/10 (40%)
C2H2 Zn finger 632..652 CDD:275368
C2H2 Zn finger 660..680 CDD:275368
sdz-38NP_496158.1 None
Blue background indicates that the domain is not in the aligned region.

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