DRSC/TRiP Functional Genomics Resources

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Protein Alignment zf30C and pzf-1

DIOPT Version :10

Sequence 1:NP_477301.1 Gene:zf30C / 34292 FlyBaseID:FBgn0270924 Length:777 Species:Drosophila melanogaster
Sequence 2:NP_001256688.1 Gene:pzf-1 / 188142 WormBaseID:WBGene00011505 Length:504 Species:Caenorhabditis elegans


Alignment Length:590 Identity:102/590 - (17%)
Similarity:158/590 - (26%) Gaps:243/590 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 CRHCDARFCHEEELTQHAKDEHGVTGAVAGQERKPFVCEKCGAEYKYQEAYRRHCRTKCGEEKLP 125
            |..|...|..:|.|.:|.:..|...          .:|..|.......|..|.|.:.|....|| 
 Worm    14 CGICGKYFSDDESLREHRRQRHMTC----------HMCLLCNRRIPENETLREHMKNKHNIWKL- 67

  Fly   126 REESRPMECKCCYTRFSSASNLSKHRRSRPDTCGQPEYDSPGSSDGMKKHKAFRKKDRNRDSDDE 190
                  ..|.||...|.:...|..|......| |:|         |:.|                
 Worm    68 ------FICVCCNWSFGTEIYLKCHEECMKST-GRP---------GLLK---------------- 100

  Fly   191 DTTSEESEDSDDDIPLASRLKTKLKQESQ-NSDSGDECPDFEPNNSEDDADASGFQLPPPAMVKV 254
                          |||..:....::.|. |:|         |.|..||...|.   |.|     
 Worm   101 --------------PLAMPMTAPAREASALNTD---------PQNGSDDVPHSS---PSP----- 134

  Fly   255 EAFDEEDFEYQDASMYVKTESTDIFSNEKDKLLDVLLNEGDGLKPFESLKVEQGAGILDEIAAVP 319
                                                                           ||
 Worm   135 ---------------------------------------------------------------VP 136

  Fly   320 LVEVAEEDVLELRGHQMEKPPGPRKRGRPPKEKIPVVKRKYRKRNAPRSPSPDDSSGTPKRVAKI 384
            :  :||..:::....:|              |.|....|.....:.||:.    .||||:.  ||
 Worm   137 M--IAENSIIQASSLKM--------------EPIESADRSSASTSTPRTL----VSGTPRE--KI 179

  Fly   385 -------------SKKELKERLKMINKMEKSWKCPHCVKIYHIRKPYEKHLRDDHKLNEAEMKEI 436
                         |.:|.:.|..|...     .|..|.:.....:....|::..|.:        
 Worm   180 PCGFCGKDFFHEGSLREHRRRFHMTGH-----TCLLCNRQIPENETVRDHMKSQHNI-------- 231

  Fly   437 FKDVDVHAKLDEEVFKCPICSKIYLVEKRLVTHMKVHGEDGKLTFKCPCYC-------------- 487
                       ::|:.|..|:..:|.:..|::|.....:.||     || |              
 Worm   232 -----------KKVYNCLCCNWTFLNQVHLISHKTCLKQTGK-----PC-CRPGHMEPLAIPRTA 279

  Fly   488 --NLFFA--TKEQATEHARAQHKEL----LYCEKCDKYMTGHDSLKNHERNFHSKKEPRSQQRNL 544
              ..||.  |:.|:.:...|...:|    |.|:.|.|:.....||..|.|..|....        
 Worm   280 SIRQFFTLKTETQSGDDDSAAGSQLFSARLSCKSCGKFFYSERSLSKHHRQIHMSGH-------- 336

  Fly   545 ICDKCGKKFTGRTSLSDHVRSDCGRLPLYGCSVCGKHLSTAGILKTHMLLHKADTPYQC-DKCGK 608
            :|..|..:.....::.:|:..:.....::.|..|....:|...|.:|:         :| .|.|.
 Worm   337 VCVLCNHQMPKTVTVQEHMEKEHNIRLVFNCRCCNWSFATRRCLMSHV---------ECLKKAGD 392

  Fly   609 TFKVK 613
            ...||
 Worm   393 ARNVK 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zf30CNP_477301.1 C2H2 Zn finger 33..53 CDD:275368
C2H2 Zn finger 61..82 CDD:275368 6/20 (30%)
C2H2 Zn finger 98..117 CDD:275368 5/18 (28%)
C2H2 Zn finger 134..152 CDD:275368 6/17 (35%)
C2H2 Zn finger 511..532 CDD:275370 7/20 (35%)
COG5048 <523..>672 CDD:227381 18/92 (20%)
C2H2 Zn finger 546..566 CDD:275368 3/19 (16%)
C2H2 Zn finger 575..595 CDD:275368 5/19 (26%)
C2H2 Zn finger 603..624 CDD:275368 5/12 (42%)
C2H2 Zn finger 632..652 CDD:275368
C2H2 Zn finger 660..680 CDD:275368
pzf-1NP_001256688.1 COG5236 <13..>62 CDD:227561 12/57 (21%)
Blue background indicates that the domain is not in the aligned region.

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