DRSC/TRiP Functional Genomics Resources

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Protein Alignment zf30C and ztf-25

DIOPT Version :9

Sequence 1:NP_477301.1 Gene:zf30C / 34292 FlyBaseID:FBgn0270924 Length:777 Species:Drosophila melanogaster
Sequence 2:NP_507456.1 Gene:ztf-25 / 180158 WormBaseID:WBGene00012405 Length:244 Species:Caenorhabditis elegans


Alignment Length:186 Identity:47/186 - (25%)
Similarity:60/186 - (32%) Gaps:39/186 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 PVCNKALVSLAGYVKHVKKHQPPGGFECRHCDARFCHEEELTQHAKDEHGVTGAVAGQERKPFVC 98
            ||..|....|       |:....|.|.|..|...|.|...|.:|.:..||          ....|
 Worm     7 PVIRKEYSEL-------KRPDLRGKFICASCGQHFQHNASLNRHRRLLHG----------NEHTC 54

  Fly    99 EKCGAEYKYQEAYRRHCRTKCGEEKLPREESRPMECKCCYTRFSSASNLSKHRRSRPDTCGQP-- 161
            ..|..:...:|..|.|.|   .|..|    .:...|.||...|||...||:|.:....| |.|  
 Worm    55 MMCDRKLNAKETIRDHMR---NEHNL----FQVFTCGCCNWSFSSKRQLSEHTKCIQGT-GAPGD 111

  Fly   162 ------EYDSPGS------SDGMKKHKAFRKKDRNRDSDDEDTTSEESEDSDDDIP 205
                  ..::|||      .......|..||:..:..|....:||..|.|.....|
 Worm   112 TIPIAKSCNAPGSLIQSTIQGTPPVVKTGRKRGGSLSSSSSVSTSISSRDVSGSPP 167

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zf30CNP_477301.1 C2H2 Zn finger 33..53 CDD:275368 5/18 (28%)
C2H2 Zn finger 61..82 CDD:275368 6/20 (30%)
C2H2 Zn finger 98..117 CDD:275368 5/18 (28%)
C2H2 Zn finger 134..152 CDD:275368 9/17 (53%)
C2H2 Zn finger 511..532 CDD:275370
COG5048 <523..>672 CDD:227381
C2H2 Zn finger 546..566 CDD:275368
C2H2 Zn finger 575..595 CDD:275368
C2H2 Zn finger 603..624 CDD:275368
C2H2 Zn finger 632..652 CDD:275368
C2H2 Zn finger 660..680 CDD:275368
ztf-25NP_507456.1 COG5236 <22..>122 CDD:227561 30/117 (26%)
C2H2 Zn finger 27..48 CDD:275368 6/20 (30%)
C2H2 Zn finger 54..75 CDD:275368 6/23 (26%)
C2H2 Zn finger 83..102 CDD:275368 9/18 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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