DRSC/TRiP Functional Genomics Resources

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Protein Alignment zf30C and gldi-8

DIOPT Version :10

Sequence 1:NP_477301.1 Gene:zf30C / 34292 FlyBaseID:FBgn0270924 Length:777 Species:Drosophila melanogaster
Sequence 2:NP_499640.1 Gene:gldi-8 / 176678 WormBaseID:WBGene00013734 Length:430 Species:Caenorhabditis elegans


Alignment Length:521 Identity:97/521 - (18%)
Similarity:169/521 - (32%) Gaps:175/521 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   192 TTSEESEDSDDDIPLASRLKTKLKQESQNSDSGDECPDFEPNNSEDDADASGFQLPPPAMVKVEA 256
            |:...|.:|:.|   |:...||.|..::.....:|. :|||   ||       :..|....:||:
 Worm    17 TSCSSSSNSEAD---ANNFSTKNKNVNEFQKLIEEL-EFEP---ED-------RRVPEVAEEVES 67

  Fly   257 FDEEDFEYQDASMYVKTESTDIFSNEKDKLLDVLLNEGDGLKPFESLKVEQGAGILDEIAAVPLV 321
            .|||:   :|..:....|..|.:.:.::::...|.:.||.       |:||.|            
 Worm    68 EDEEE---EDVQIKYPYERKDAYQDLQERIERRLNDSGDE-------KLEQKA------------ 110

  Fly   322 EVAEEDVLELRGHQMEKPPGPRKRGRPPKEKIPVVKRKYRKRNAPRSPSPDDSSGTPKRVAKISK 386
                                        ||...:::....:....:....:||...|.....|  
 Worm   111 ----------------------------KELQSLIRMSQSQWKVEQKQQLEDSLLKPHTAGSI-- 145

  Fly   387 KELKERLKMINKMEKSWKCPHCVKIYHIRKPYEKHLRDDHKLNEAEMKEIFKDVDVHAKLDEEVF 451
                            :.|..|.|.:...:..:.|....|.|:..:                  .
 Worm   146 ----------------FTCVMCSKAFPNAEALQIHTDQVHDLSRLK------------------H 176

  Fly   452 KCPICSKIYLVEKRLVTHMKVHGEDGKLTFKCPCYCNLFFATKEQATEHARAQHKE--------L 508
            :|.:|.|.|..:|.|..||.:|.::    .:|. .|:|.|.:::....|....|:|        .
 Worm   177 RCKLCGKAYKRKKNLDAHMALHLKE----IQCD-NCSLVFQSEKSLQSHIIRHHQEDADELEVWK 236

  Fly   509 LYCEKCDKYMTGHDSLKNHERNFHSKKEPRSQQ-------------------------------- 541
            ..|..| |.:....|:|.||....::::...:|                                
 Worm   237 APCSIC-KELFPSTSVKTHEWYCKNREKIIEKQRVSKILKVQSLPSSPALSTVSYASFSSCQPGP 300

  Fly   542 -------RNLICDKCGKKFTGRTSLSDHV-------------------RSDCGRLPLYGCSVCGK 580
                   |:..|..||:.|..|.|:..||                   .::..:.| |.|..|||
 Worm   301 ITSPVSYRDKSCQVCGESFASRQSMLRHVGRKHPDAKNDPNVTAVRYISAESPKHP-YACIECGK 364

  Fly   581 HLSTAGILKTHML-LHKADTPYQCDKCGKTFKVKAQYKSHLKTRHTDYKPYKCHLCPKEYPYRES 644
            ..:|...|.||.. :|.....::|..|.|::.|.::.:.|:|..|....| |.....:|.|..:.
 Worm   365 RFTTVTALSTHKARVHSQSNRFECTICHKSYPVPSELRKHIKRVHEKDAP-KSRSALEELPEMDD 428

  Fly   645 L 645
            :
 Worm   429 I 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zf30CNP_477301.1 C2H2 Zn finger 33..53 CDD:275368
C2H2 Zn finger 61..82 CDD:275368
C2H2 Zn finger 98..117 CDD:275368
C2H2 Zn finger 134..152 CDD:275368
C2H2 Zn finger 511..532 CDD:275370 7/20 (35%)
COG5048 <523..>672 CDD:227381 36/182 (20%)
C2H2 Zn finger 546..566 CDD:275368 8/38 (21%)
C2H2 Zn finger 575..595 CDD:275368 8/20 (40%)
C2H2 Zn finger 603..624 CDD:275368 6/20 (30%)
C2H2 Zn finger 632..652 CDD:275368 2/14 (14%)
C2H2 Zn finger 660..680 CDD:275368
gldi-8NP_499640.1 C2H2 Zn finger 148..169 CDD:275368 4/20 (20%)
zf-C2H2 176..198 CDD:395048 8/21 (38%)
C2H2 Zn finger 178..198 CDD:275368 8/19 (42%)
C2H2 Zn finger 204..224 CDD:275368 5/20 (25%)
C2H2 Zn finger 312..333 CDD:275368 8/20 (40%)
C2H2 Zn finger 359..380 CDD:275368 8/20 (40%)
C2H2 Zn finger 388..409 CDD:275368 6/20 (30%)
Blue background indicates that the domain is not in the aligned region.

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