DRSC/TRiP Functional Genomics Resources

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Protein Alignment zf30C and Zfp658

DIOPT Version :10

Sequence 1:NP_477301.1 Gene:zf30C / 34292 FlyBaseID:FBgn0270924 Length:777 Species:Drosophila melanogaster
Sequence 2:NP_001406952.1 Gene:Zfp658 / 102546648 RGDID:7541917 Length:883 Species:Rattus norvegicus


Alignment Length:691 Identity:162/691 - (23%)
Similarity:242/691 - (35%) Gaps:190/691 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 CPVCNKALVSLAGYVKHVKKHQPPGGFECRHCDARFCHEEELTQHAKDEHGVTGAVAGQERKPFV 97
            ||.|.|:....:....|.:.|.....:|||.|...|.:..:|..|.:...|         .:|:|
  Rat   326 CPDCGKSFSRTSNLQVHHRIHTGEKPYECRDCGKSFNNTSQLKVHYRIHTG---------ERPYV 381

  Fly    98 CEKCGAEYKYQEAYRRHCRTKCGEEKLPREESRPMECKCCYTRFSSASNLSK----HRRSRPDTC 158
            |..||..:|.:.....|.....||        :|.:|..|...||..|.|..    |.:.:|..|
  Rat   382 CPVCGKAFKQKSILSTHETIHTGE--------KPYKCTVCGKLFSCTSRLKVHYQIHMKEKPYEC 438

  Fly   159 GQPEYDSPGSSDGMKKHKAFRKKDRNRDSDDEDTTSEESEDSDDDIPLASRLKTKLKQES-QNSD 222
            |.             ..|||::|                          |.|....|..| |...
  Rat   439 GD-------------CGKAFKRK--------------------------SSLTVHQKIHSRQTRH 464

  Fly   223 SGDECPDFEPNNSEDDADASGFQLPPPAMVKVEAFDEEDFEYQDASMYVKTESTDIFSNEKDKLL 287
            :..||.......||                                  :.|...........|..
  Rat   465 ACSECGKEFSQKSE----------------------------------LSTHQRLHLGKNSHKCA 495

  Fly   288 DVLLNEGDGLKPFESLKVEQGAGILDEIAAVPLVEVAEEDVLELRGHQMEKPPGPRKRGRPPKEK 352
            |.    |........||:..                        |.|..|||             
  Rat   496 DC----GKAFTYASQLKMHH------------------------RVHTGEKP------------- 519

  Fly   353 IPVVKRKYRKRNAPRSPSPDDSSGTPKRVAKI--------------SKKELKERLKMINKMEKSW 403
                   |:.|:..:|.:...:....:|:.|:              ||.:|:|. :.|:..||.:
  Rat   520 -------YKCRDCGKSFTYSFTLNVHRRIHKVEKPHKCSVCGKALASKYQLEEH-ERIHTGEKPY 576

  Fly   404 KCPHCVKIYHIRKPYEK----HLRDD----HKLNEA--EMKEIFKDVDVHAKLDEEVFKCPICSK 458
            .|..|.|.:|.|..:.:    |.||.    ||..:|  :..::......|.  .|:.:.|..|.|
  Rat   577 VCTECGKGFHGRSGFLRHQITHTRDKPFVCHKCGKAFFQRSQLTSHQQTHT--GEKPYPCRYCGK 639

  Fly   459 IYLVEKRLVTHMKVHGEDGKLTFKCPCYCNLFFATKEQATEHARAQHKELLY-CEKCDKYMTGHD 522
            .:....:|..|.::|  .|:..:||. ||...|:...|..||.|....|..| |.:|.|..:...
  Rat   640 SFSHTSQLTVHHRIH--TGERPYKCN-YCGKSFSNSSQLKEHLRIHTGETPYACSECGKAFSRRS 701

  Fly   523 SLKNHERNFHSKKEPRSQQRNLICDKCGKKFTGRTSLSDHVRSDCGRLPLYGCSVCGKHLSTAGI 587
            ||     |.|:|  ..:.:::.||.:|||.|:.::.|..|.|...|..| |.|..|||.|::.|.
  Rat   702 SL-----NLHTK--IHTGEKHHICSECGKAFSQKSVLRTHQRIHTGEKP-YKCGDCGKALASKGQ 758

  Fly   588 LKTHMLLHKADTPYQCDKCGKTFKVKAQYKSHLKTRHTDYKPYKCHLCPKEYPYRESLLTHMTVH 652
            |:.|..:|..:.||.|.:|||.|..::....|..| ||..:|:.|..|.|.:..:.:|.:|..:|
  Rat   759 LRDHQRIHTGEKPYVCPECGKGFFGRSSLHRHQMT-HTKERPFVCQKCGKTFIQKSALTSHQQIH 822

  Fly   653 TGIKRFLCNNCGKRFTCISNLQAHRKVH-------ADTCGQ 686
            ||.|.::|..|||.|...|:|..|:..|       ...||:
  Rat   823 TGEKPYVCPECGKGFYNKSSLPRHQMTHTKGRSFVCQKCGK 863

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zf30CNP_477301.1 C2H2 Zn finger 33..53 CDD:275368 5/19 (26%)
C2H2 Zn finger 61..82 CDD:275368 6/20 (30%)
C2H2 Zn finger 98..117 CDD:275368 5/18 (28%)
C2H2 Zn finger 134..152 CDD:275368 7/21 (33%)
C2H2 Zn finger 511..532 CDD:275370 6/20 (30%)
COG5048 <523..>672 CDD:227381 52/148 (35%)
C2H2 Zn finger 546..566 CDD:275368 8/19 (42%)
C2H2 Zn finger 575..595 CDD:275368 8/19 (42%)
C2H2 Zn finger 603..624 CDD:275368 7/20 (35%)
C2H2 Zn finger 632..652 CDD:275368 5/19 (26%)
C2H2 Zn finger 660..680 CDD:275368 8/19 (42%)
Zfp658NP_001406952.1 KRAB 23..80 CDD:214630
C2H2 Zn finger 272..291 CDD:275368
C2H2 Zn finger 299..319 CDD:275368
SFP1 <313..400 CDD:227516 21/82 (26%)
C2H2 Zn finger 326..346 CDD:275368 5/19 (26%)
C2H2 Zn finger 354..374 CDD:275368 6/19 (32%)
COG5048 378..813 CDD:227381 131/578 (23%)
C2H2 Zn finger 382..402 CDD:275368 5/19 (26%)
C2H2 Zn finger 410..430 CDD:275368 6/19 (32%)
C2H2 Zn finger 438..458 CDD:275368 9/58 (16%)
C2H2 Zn finger 466..486 CDD:275368 5/53 (9%)
C2H2 Zn finger 494..514 CDD:275368 5/47 (11%)
C2H2 Zn finger 522..542 CDD:275368 3/19 (16%)
C2H2 Zn finger 550..570 CDD:275368 4/20 (20%)
C2H2 Zn finger 578..598 CDD:275368 5/19 (26%)
C2H2 Zn finger 606..626 CDD:275368 3/19 (16%)
C2H2 Zn finger 634..654 CDD:275368 5/19 (26%)
C2H2 Zn finger 662..682 CDD:275368 8/20 (40%)
C2H2 Zn finger 690..710 CDD:275368 8/26 (31%)
C2H2 Zn finger 718..738 CDD:275368 8/19 (42%)
C2H2 Zn finger 746..766 CDD:275368 8/19 (42%)
C2H2 Zn finger 774..794 CDD:275368 7/20 (35%)
COG5048 796..>869 CDD:227381 21/68 (31%)
C2H2 Zn finger 802..822 CDD:275368 5/19 (26%)
C2H2 Zn finger 830..850 CDD:275368 8/19 (42%)
C2H2 Zn finger 858..878 CDD:275368 2/6 (33%)
Blue background indicates that the domain is not in the aligned region.

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