DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4e3 and Cyp4f1

DIOPT Version :10

Sequence 1:NP_523527.1 Gene:Cyp4e3 / 34291 FlyBaseID:FBgn0015035 Length:526 Species:Drosophila melanogaster
Sequence 2:NP_062569.2 Gene:Cyp4f1 / 56266 RGDID:70926 Length:524 Species:Rattus norvegicus


Alignment Length:544 Identity:154/544 - (28%)
Similarity:270/544 - (49%) Gaps:70/544 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 WLAVL----ALLVLPLITLVYFERKASQRRQLLKEFNGPTPVP---ILGNANRIGKNPAE----- 54
            |..:|    :.::..::|.:|...:..:|   |:.|  |.|..   ::|:...:  .|.|     
  Rat    19 WQTLLLFGASWILAQILTQIYAAYRNFRR---LRGF--PQPPKRNWLMGHVGMV--TPTEQGLKE 76

  Fly    55 ---ILSTFFDWWYDYGKDNFLFWIGYSSHIV-MTNPKQLEYILNSQQLIQKSTI--YDLLHPWLG 113
               ::.|:        ...||.|||....:: :.:...:..|||:...:....:  |.:|.||||
  Rat    77 LTRLVGTY--------PQGFLMWIGPMVPVITLCHSDIVRSILNASAAVALKDVIFYTILKPWLG 133

  Fly   114 HGLLTSFGSKWHKHRKMITPSFHFNILQDFHEVMNENSAKFMTQLKK-ASAGDTIIDFQEHANYL 177
            .|||.|.|.||.:||:|:||:||||||:.:.::.|:::.....:.|: .|.|.:.:|..||.:.:
  Rat   134 DGLLVSAGDKWSRHRRMLTPAFHFNILKPYVKIFNDSTNIMHAKWKRLISEGSSRLDMFEHVSLM 198

  Fly   178 TLDVICDTAMGVPINAMEQRDSSIVQAFRDMCYNINMRAFHPFKRSNRVFSLTPEFSAYQKTLKT 242
            |||.:.........|..| :.|..:.|..::...:..|...|....:.:::|||:...:.|....
  Rat   199 TLDSLQKCVFSFDSNCQE-KSSEYIAAILELSALVAKRHQQPLLFMDLLYNLTPDGMRFHKACNL 262

  Fly   243 LQDFTYDIIEKRVYALQNGGSKEDHDPSLPRKKMAFLDT-LLSSTIDGRPLTRQEIYEEVSTFMF 306
            :.:||..:|.:|...|.:.|..|........|.:.|:|. ||:...||:.|:.::|..|..||||
  Rat   263 VHEFTDAVIRERRRTLPDQGLDEFLKSKAKSKTLDFIDVLLLTKDEDGKELSDEDIRAEADTFMF 327

  Fly   307 EGHDTTTSGVSFSVYLLSRHPDVQRKLYREQCEVMGHDMNRSVSFQEIAKMKYLDLFIKEAQRVY 371
            ||||||.||:|:.:|.|::||:.|.:..:|..|::.......:.:.::|::.:|.:.|||:.|::
  Rat   328 EGHDTTASGLSWILYNLAKHPEYQERCRQEVQELLRDRDPEEIEWDDLAQLPFLTMCIKESLRLH 392

  Fly   372 PSVPFIGRYCDKDYDI-NGSIVPKGTTLNLALILLGYNDRIFKDPHHFRPERFEEEK---PAPFE 432
            |.|..|.|.|.:|..: :|..:|||....:::..:.:|..::.||..:.|.||:.|.   .:|..
  Rat   393 PPVTVISRCCTQDILLPDGRTIPKGIICLISIFGIHHNPSVWPDPEVYNPFRFDPENIKDSSPLA 457

  Fly   433 YLPFSAGPRNCIGQKFALLELKTVISKVVRSFEVLPAVDELVSTDGRLNTYLGLAPDEKLKREAG 497
            ::||||||||||||.||:.|:|..::..:..|.:|                    ||:|      
  Rat   458 FIPFSAGPRNCIGQTFAMSEMKVALALTLLRFRLL--------------------PDDK------ 496

  Fly   498 RHKYDPILSAVLTLKSDNGLHLRL 521
                :|.....|.|:::.||.||:
  Rat   497 ----EPRRQPELILRAEGGLWLRV 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4e3NP_523527.1 CYP4 68..519 CDD:410721 139/459 (30%)
Cyp4f1NP_062569.2 CYP4F 74..515 CDD:410772 140/479 (29%)

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