DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4e3 and cyp4b1.2

DIOPT Version :9

Sequence 1:NP_523527.1 Gene:Cyp4e3 / 34291 FlyBaseID:FBgn0015035 Length:526 Species:Drosophila melanogaster
Sequence 2:NP_001017348.1 Gene:cyp4b1.2 / 550102 XenbaseID:XB-GENE-963387 Length:515 Species:Xenopus tropicalis


Alignment Length:543 Identity:158/543 - (29%)
Similarity:277/543 - (51%) Gaps:63/543 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 WLAV--------LALLVLPLITLVYFERKASQRR--QLLKEFNGPTPVPILGNAN---RIGKNPA 53
            ||:|        :|||.:.|:.|..:...:..||  ..|..|.||....:.|:.|   |.||:..
 Frog    13 WLSVNIYQIGQFVALLCVVLLLLKAYALYSRGRRFAAALVPFPGPPAHWLYGHVNQFRRDGKDLD 77

  Fly    54 EILSTFFDWWYDYGKDNFLFWIG-YSSHIVMTNPKQLEYILNSQQLIQKSTIYDLLHPWLGHGLL 117
            .::.     |.:...:.|..||| :...:::|:|...:.:..... .:.||.|:.|.||:|.|||
 Frog    78 RLMV-----WVNKYPNAFPLWIGKFFGTLIITDPDYAKVVFGRSD-PKTSTGYNFLVPWIGKGLL 136

  Fly   118 TSFGSKWHKHRKMITPSFHFNILQDFHEVMNENSAKFMTQLKKASAGDTIIDFQEHANYLTLDVI 182
            ...|:.|.:||::|||.||:::|:.:..::::::...:.:|...|..|..::..:|.:.:|||.|
 Frog   137 ILSGNTWFQHRRLITPGFHYDVLKPYVSLISDSTKIMLDELDVYSNKDESVELFQHVSLMTLDSI 201

  Fly   183 CDTAMGVPINAMEQRDSSIVQAFRDMCY--NINMRAFHPFKRSNRVFSLTPEFSAYQKTLKTLQD 245
            ...|.....|....:|:..:||..|:.:  ...:|.| |: .||.::.|:|....::|..:.:..
 Frog   202 MKCAFSYHSNCQTDKDNDYIQAVYDLSWLTQQRIRTF-PY-HSNLIYFLSPHGFRFRKACRIVHL 264

  Fly   246 FTYDIIEKRVYALQNGGSKEDHDPSLPRKKMAFLDTLL-SSTIDGRPLTRQEIYEEVSTFMFEGH 309
            .|..:|.:|...|:   |||:.:....::.:.|||.|| |...:|:.|:.:::..||.|||||||
 Frog   265 HTDKVIGQRKKLLE---SKEELEKVQKKRHLDFLDILLCSKDENGQGLSHEDLRAEVDTFMFEGH 326

  Fly   310 DTTTSGVSFSVYLLSRHPDVQRKLYREQCEVMGHDMNRSVSFQEIAKMKYLDLFIKEAQRVYPSV 374
            |||:||:|:.:|.::.||:.|:|...|..|.:|.  .:::.:.::.:|.|..:.|||:.|:||.|
 Frog   327 DTTSSGISWILYCMATHPEHQQKCREEISEALGE--RQTMEWDDLNRMPYTTMCIKESLRLYPPV 389

  Fly   375 PFIGRYCDKDYDI-NGSIVPKGTTLNLALILLGYNDRIFKDPHHFRPERFEEE---KPAPFEYLP 435
            |.:.|...|.... :|..:|.|..::|.:..:..|..::|||..|.|.||..|   |.....::|
 Frog   390 PSVSRELAKPITFHDGRSLPAGMLVSLQIYAIHRNPNVWKDPEIFDPLRFSPENSSKRHSHAFVP 454

  Fly   436 FSAGPRNCIGQKFALLELKTVISKVVRSFEVLPAVDELVSTDGRLNTYLGLAPDEKLKREAGRHK 500
            |:|||||||||.||:.|:|..::..::.||:.|.:.:                            
 Frog   455 FAAGPRNCIGQNFAMNEMKVAVALTLKRFELSPDLSK---------------------------- 491

  Fly   501 YDPILSAVLTLKSDNGLHLRLRE 523
             .|:....|.|:|.||:|:.|::
 Frog   492 -PPLKQPQLVLRSKNGIHVYLKK 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4e3NP_523527.1 p450 35..468 CDD:278495 137/443 (31%)
cyp4b1.2NP_001017348.1 p450 55..508 CDD:278495 144/494 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X23
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

Return to query results.
Submit another query.