DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4e3 and Cyp4f40

DIOPT Version :9

Sequence 1:NP_523527.1 Gene:Cyp4e3 / 34291 FlyBaseID:FBgn0015035 Length:526 Species:Drosophila melanogaster
Sequence 2:XP_038935701.1 Gene:Cyp4f40 / 503122 RGDID:1559596 Length:530 Species:Rattus norvegicus


Alignment Length:496 Identity:147/496 - (29%)
Similarity:246/496 - (49%) Gaps:71/496 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 KNPAEILSTFFDWWYDYGKDNFLFWIG-YSSHIVMTNPKQLEYILNSQQLI--QKSTIYDLLHPW 111
            |...|:::|:        ...|:.|:| ....|.:.:|..:..:|::...:  :....|..|.||
  Rat    75 KQMTELVATY--------PQGFMTWLGPIVPLITLCHPDIIRSVLSASAAVAPKDGIFYSFLKPW 131

  Fly   112 LGHGLLTSFGSKWHKHRKMITPSFHFNILQDFHEVMNENS----AKFMTQLKKASAGDTIIDFQE 172
            ||.|||.|...||.:||.|:||:||||||:.:.::.|:::    ||:   |:.||.|...:|..|
  Rat   132 LGDGLLVSASDKWSRHRSMLTPAFHFNILKPYVKIFNDSTNIMHAKW---LRLASGGSAHLDMFE 193

  Fly   173 HANYLTLDVICDTAMGVPINAMEQRDSSIVQAFRDMCYNINMRAFHPFKRSNRVFSLTPEFSAYQ 237
            :.:.:|||.:.........|..| :.|..:.|..::...:..|........:.::.|||:...:.
  Rat   194 NISLMTLDTLQKCVFSFNSNCQE-KPSEYIAAILELSALVVKRNEQLLLHMDLLYRLTPDGRRFY 257

  Fly   238 KTLKTLQDFTYDIIEKRVYALQNGGSKEDHDPSLPRKKMAFLDT-LLSSTIDGRPLTRQEIYEEV 301
            |....:.||||.:|::|...|...|..:........|.:.|:|. |||...||:.|:.::|..|.
  Rat   258 KACHLVHDFTYAVIQERRRTLPKHGGDDVIKAKAKSKTLDFIDVLLLSKDEDGKELSDEDIRAEA 322

  Fly   302 STFMFEGHDTTTSGVSFSVYLLSRHPDVQRKLYREQCEVMGHDMNRSVSFQEI------------ 354
            .||||||||||.||:|:.:|.|::||:     |:|:|.....::.|....:||            
  Rat   323 DTFMFEGHDTTASGLSWILYNLAKHPE-----YQERCRQEVQELLRDRDSEEIECSCGVLLRDDL 382

  Fly   355 AKMKYLDLFIKEAQRVYPSVPFIGRYCDKDYDI-NGSIVPKGTTLNLALILLGYNDRIFKDPHHF 418
            |::.:|.:.|||:.|::|.|..:.|.|.:|..: :|.::|||....:.:....:|..:::||..:
  Rat   383 AQLPFLTMCIKESLRLHPPVTMVSRCCTQDISLPDGRVIPKGIICIINIFATHHNPTVWQDPEVY 447

  Fly   419 RPERFEEEK---PAPFEYLPFSAGPRNCIGQKFALLELKTVISKVVRSFEVLPAVDELVSTDGRL 480
            .|.||:.|.   .:|..::||||||||||||.||:.|:|..::..:..|.||             
  Rat   448 DPFRFDPENIQARSPLAFIPFSAGPRNCIGQTFAMNEMKVAVALTLLRFRVL------------- 499

  Fly   481 NTYLGLAPDEKLKREAGRHKYDPILSAVLTLKSDNGLHLRL 521
                   ||:|          :|.....|.|::::||.||:
  Rat   500 -------PDDK----------EPRRKPELILRAEDGLWLRV 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4e3NP_523527.1 p450 35..468 CDD:278495 136/441 (31%)
Cyp4f40XP_038935701.1 CYP4F 74..522 CDD:410772 145/493 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166348619
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9GY
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X23
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.650

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