DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4e3 and Cyp28d2

DIOPT Version :10

Sequence 1:NP_523527.1 Gene:Cyp4e3 / 34291 FlyBaseID:FBgn0015035 Length:526 Species:Drosophila melanogaster
Sequence 2:NP_608911.1 Gene:Cyp28d2 / 33748 FlyBaseID:FBgn0031688 Length:501 Species:Drosophila melanogaster


Alignment Length:548 Identity:129/548 - (23%)
Similarity:225/548 - (41%) Gaps:148/548 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LLVLPLITLVY--------FERKASQRRQLLKEFNGPTPVPILGNANRI---GKNPAEILSTFFD 61
            :|||.|:.|||        :.||...:       ..|| .|.:|:...|   .:|.|..:...::
  Fly     9 VLVLTLLVLVYVFLTWNFNYWRKRGIK-------TAPT-WPFVGSFPSIFTRKRNIAYDIDDIYE 65

  Fly    62 WWYDYGKDNFLFWIGYSSHIVMTNPKQL-----EYI-----------LNSQ--QLIQKSTIYDLL 108
            .:.|  .||.   :|    :..|...||     |||           .|::  ..:.|.|  |::
  Fly    66 KYKD--TDNM---VG----VFTTRVPQLLVMCPEYIHKIYATDFRSFHNNEWRNFVNKKT--DMI 119

  Fly   109 HPWLGHGLLTSFGSKWHKHRKMITPSFHFNILQDFHEVMNENSAKFMTQLKK-----ASAGDTII 168
               ||:......|.:|.:.|..|.|:...|.::..:.|......||:..:::     .|.|   :
  Fly   120 ---LGNNPFVLTGDEWKERRSEIMPALSPNRVKAVYPVSQSVCKKFVEYIRRQQQMATSEG---L 178

  Fly   169 DFQEHANYLTLDVICDTAMGVPINAMEQRDSSIVQAFRDMCYNINMRAFHPFKRSNRVFSLTPEF 233
            |..:.:...|.:|:.|..:||.           .|:|.|....:       .|...|||:.:.||
  Fly   179 DAMDLSLCYTTEVVSDCGLGVS-----------AQSFTDTPTPL-------LKMIKRVFNTSFEF 225

  Fly   234 SAY-------QKTL---------KTLQDFTYDIIEKRVYALQNGGSKEDHDP------SLPRKKM 276
            ..|       ||..         |..:.|..||| :|...|:....::..|.      .|..||.
  Fly   226 IFYSVVTNLWQKVRKFYSVPFFNKETEVFFLDII-RRCITLRLEKPEQQRDDFLNYMLQLQEKKG 289

  Fly   277 AFLDTLLSSTIDGRPLTRQEIYEEVSTFMFEGHDTTTSGVSFSVYLLSRHPDVQRKLYREQCEVM 341
            ...|.:|.:|:               ||:.:|.:||...::..:.:|.|:|:.|.|:.:|    :
  Fly   290 LHTDNILINTM---------------TFILDGFETTALVLAHIMLMLGRNPEEQDKVRKE----I 335

  Fly   342 GHDMNRSVSFQEIAKMKYLDLFIKEAQRVY-PSV--------PFIGRYCDKDYDINGSIV--PKG 395
            |   :..::|.:::::.:||..|.|..|:: |.|        ||  .:.:|    ||..|  ..|
  Fly   336 G---SADLTFDQMSELPHLDACIYETLRLFSPQVAARKLVTEPF--EFANK----NGRTVHLKPG 391

  Fly   396 TTLNLALILLGYNDRIFKDPHHFRPERFEEEKPAPFE-------YLPFSAGPRNCIGQKFALLEL 453
            ..:.:.:..|.::.:.::||..|:||||.|......:       ||.|..|||:|.|.:|||.:|
  Fly   392 DVVTIPVKALHHDPQYYEDPLTFKPERFLESNGGGMKSYRDRGVYLAFGDGPRHCPGMRFALTQL 456

  Fly   454 KTVISKVVRSFEVLPAVDELVSTDGRLN 481
            |..:.:::|:||:  .|:....:|.:::
  Fly   457 KAALVEILRNFEI--KVNPKTRSDNQID 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4e3NP_523527.1 CYP4 68..519 CDD:410721 112/477 (23%)
Cyp28d2NP_608911.1 CYP6-like 74..495 CDD:410679 110/470 (23%)

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