DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4e3 and Cyp4f39

DIOPT Version :10

Sequence 1:NP_523527.1 Gene:Cyp4e3 / 34291 FlyBaseID:FBgn0015035 Length:526 Species:Drosophila melanogaster
Sequence 2:XP_234837.3 Gene:Cyp4f39 / 299566 RGDID:1308796 Length:550 Species:Rattus norvegicus


Alignment Length:547 Identity:155/547 - (28%)
Similarity:279/547 - (51%) Gaps:74/547 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 VLALLVLPLITLVYFERKASQRRQLLKEFN------GPTPVP-----ILGN-----ANRIG-KNP 52
            ||:.|:|.|:.|::  |...|..:|..:|.      ...|.|     :||:     .|..| :|.
  Rat    23 VLSALLLFLLFLLF--RLLLQAFKLFSDFRITCRRLSCFPEPPGRHWLLGHMSMYLPNEKGLQNE 85

  Fly    53 AEILSTFFDWWYDYGKDNFLFWIG-YSSHIVMTNPKQLEYILNSQQLI--QKSTIYDLLHPWLGH 114
            .::|.|.        ....|.|:| :...:|:.:|..::.:|.:...|  :....|..|.||||.
  Rat    86 KKVLDTM--------HHIILAWVGPFLPLLVLVHPDYIKPVLGASAAIAPKDEFFYSFLKPWLGD 142

  Fly   115 GLLTSFGSKWHKHRKMITPSFHFNILQDFHEVMNEN----SAKFMTQLKKASAGDTIIDFQEHAN 175
            |||.|.|:||.:||:::||:|||:||:.:.::.|::    .||:...|.:.|.  |..|..||.:
  Rat   143 GLLISKGNKWSRHRRLLTPAFHFDILKPYMKIFNQSVNIMHAKWRRHLAEGSV--TSFDMFEHVS 205

  Fly   176 YLTLDVICDTAMGVPINAMEQRDSSIVQAFRDMCYNINMRAFHPFKRSNRVFSLTPEFSAYQKTL 240
            .:|||.:.........:..|:. |..:.:..::...:..|.:......:.::.||.:...:::..
  Rat   206 LMTLDSLQKCVFSYSSDCQEKL-SDYISSIIELSALVVRRQYRLHHYLDFIYYLTADGRRFRQAC 269

  Fly   241 KTLQDFTYDIIEKRVYALQNGGSKEDHDPSLPRKKMAFLDT-LLSSTIDGRPLTRQEIYEEVSTF 304
            .|:.:||.::|::|..||:..|: |....:...|.:.|:|. ||:...:|:.|:.::|..|..||
  Rat   270 DTVHNFTTEVIQQRRRALRELGA-EAWLKAKQGKTLDFIDVLLLAKDEEGKELSDEDIRAEADTF 333

  Fly   305 MFEGHDTTTSGVSFSVYLLSRHPDVQRKLYREQCEVM-GHDMNRSVSFQEIAKMKYLDLFIKEAQ 368
            ||||||||:||:|::::.|:::|:.|.|...|..||| |.:: ..:.:.::.::.:..:.|||:.
  Rat   334 MFEGHDTTSSGLSWALFNLAKYPEYQDKCREEIQEVMKGREL-EELDWDDLTQLPFTTMCIKESL 397

  Fly   369 RVYPSVPFIGRYCDKDYDI-NGSIVPKGTTLNLALILLGYNDRIFKDPHHFRPERFEEEKP---A 429
            |.:|.|..|.|.|.:|..: :|.|:|||....:::....||..::.|...:.|.||:.:.|   :
  Rat   398 RQFPPVTLISRRCTEDIKLPDGRIIPKGIICLVSIYGTHYNPLVWPDSKVYNPYRFDPDIPQQRS 462

  Fly   430 PFEYLPFSAGPRNCIGQKFALLELKTVISKVVRSFEVLPAVDELVSTDGRLNTYLGLAPDEKLKR 494
            |..::||||||||||||.||:.|::.|::..:..|.:  :||.                ..|::|
  Rat   463 PLAFVPFSAGPRNCIGQSFAMAEMRVVVALTLLRFRL--SVDR----------------TRKVRR 509

  Fly   495 EAGRHKYDPILSAVLTLKSDNGLHLRL 521
            :           ..|.|:::|||.|.:
  Rat   510 K-----------PELILRTENGLWLNV 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4e3NP_523527.1 CYP4 68..519 CDD:410721 135/463 (29%)
Cyp4f39XP_234837.3 CYP4F 82..523 CDD:410772 138/482 (29%)

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