DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4e3 and Cyp4f6

DIOPT Version :10

Sequence 1:NP_523527.1 Gene:Cyp4e3 / 34291 FlyBaseID:FBgn0015035 Length:526 Species:Drosophila melanogaster
Sequence 2:XP_006241111.1 Gene:Cyp4f6 / 266689 RGDID:708365 Length:538 Species:Rattus norvegicus


Alignment Length:536 Identity:154/536 - (28%)
Similarity:260/536 - (48%) Gaps:87/536 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 PTPVPILGNANRIGKNPAEILS---TFFD---------------WWYDY---------------- 66
            |..:.:||.|:.|   .|.||:   ||:|               |::.:                
  Rat    19 PWHLLLLGGASWI---LARILAWIYTFYDNCCRLRCFPQPPKPSWFWGHLTLMKNNEEGMQFIAH 80

  Fly    67 ----GKDNFLFWIGYSSHIV-MTNPKQLEYILNSQQLI--QKSTIYDLLHPWLGHGLLTSFGSKW 124
                .:|..|.|:|....|: :.:|..:..:|.:...:  ::.|:|..|.||||.|||.|.|.||
  Rat    81 LGRNFRDIHLSWVGPVYPILRLVHPNVIAPLLQASAAVAPKEMTLYGFLKPWLGDGLLMSAGEKW 145

  Fly   125 HKHRKMITPSFHFNILQDFHEVMNEN----SAKFMTQLKKASAGDTIIDFQEHANYLTLDVICDT 185
            :.||:::||:|||:||:.:.::.|::    .||:.....|.||.   :|..||.:.:|||.:...
  Rat   146 NHHRRLLTPAFHFDILKSYVKIFNKSVNTMHAKWQRLTAKGSAR---LDMFEHISLMTLDSLQKC 207

  Fly   186 AMGVPINAMEQRDSSIVQAFRDMCYNINMRAFHPFKRSNRVFSLTPEFSAYQKTLKTLQDFTYDI 250
            ......|..|. :|..:.|..::...|..|...||...:.::.||.:...::|....:.:||..:
  Rat   208 IFSFDSNCQES-NSEYIAAILELSSLIVKRQRQPFLYLDFLYYLTADGRRFRKACDVVHNFTDAV 271

  Fly   251 IEKRVYALQNGGSKEDHDPSLPRKKMAFLDTLLSSTID-GRPLTRQEIYEEVSTFMFEGHDTTTS 314
            |.:|...|...|..|........|.:.|:|.||.:..: |:.|:..:|..|..||||.|||||.|
  Rat   272 IRERRSTLNTQGVDEFLKARAKTKTLDFIDVLLLAKDEHGKGLSDVDIRAEADTFMFGGHDTTAS 336

  Fly   315 GVSFSVYLLSRHPDVQRKLYREQCEVMGHDMNRSVSFQEIAKMKYLDLFIKEAQRVYPSVPFIGR 379
            .:|:.:|.|:|||:.|.:..:|..|::.......:.:.::|::.:|.:.|||:.|::|.|..|.|
  Rat   337 ALSWILYNLARHPEYQERCRQEVRELLRDREPEEIEWDDLAQLPFLTMCIKESLRLHPPVLLISR 401

  Fly   380 YCDKDYDI-NGSIVPKGTTLNLALILLGYNDRIFKDPHHFRPERFEEEKP---APFEYLPFSAGP 440
            .|.:|..: :|.::|||....:::..:.:|..::.||..:.|.||:.|.|   :|..::||||||
  Rat   402 CCSQDIVLPDGRVIPKGNICVISIFGVHHNPSVWPDPEVYNPFRFDPENPQKRSPLAFIPFSAGP 466

  Fly   441 RNCIGQKFALLELKTVISKVVRSFEVLPAVDELVSTDGRLNTYLGLAPDEKLKREAGRHKYDPIL 505
            ||||||.||:.|:|..::..:..|.||                    ||:|          :|..
  Rat   467 RNCIGQTFAMSEIKVALALTLLRFCVL--------------------PDDK----------EPRR 501

  Fly   506 SAVLTLKSDNGLHLRL 521
            ...|.|:::.||.||:
  Rat   502 KPELILRAEGGLWLRV 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4e3NP_523527.1 CYP4 68..519 CDD:410721 140/462 (30%)
Cyp4f6XP_006241111.1 CYP4F 75..516 CDD:410772 140/474 (30%)

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