DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4e3 and Cyp4a8

DIOPT Version :9

Sequence 1:NP_523527.1 Gene:Cyp4e3 / 34291 FlyBaseID:FBgn0015035 Length:526 Species:Drosophila melanogaster
Sequence 2:XP_038965258.1 Gene:Cyp4a8 / 266674 RGDID:628846 Length:510 Species:Rattus norvegicus


Alignment Length:548 Identity:150/548 - (27%)
Similarity:261/548 - (47%) Gaps:92/548 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 VLALLVLPLITLVYFERKASQRRQLLK---EFNGPTPVPILGNANRIGKNPAEILSTFFDWWYDY 66
            ||.:|:|...|..::    ..||.||:   :|  |:|             |:.       |::.:
  Rat    24 VLTVLLLLFKTAQFY----LHRRWLLRATQQF--PSP-------------PSH-------WFFGH 62

  Fly    67 GKDNFLF--------------------WI-GYSSHIVMTNPKQLEYILNSQQLIQKS-TIYDLLH 109
             |.:||.                    |: |.:..|.:.:|..::.||....  .|| ..|..|.
  Rat    63 -KLSFLVDQEFQDILTRVKNFPSACPQWLWGSNVRIQVYDPDYMKLILGRSD--PKSHHSYRFLA 124

  Fly   110 PWLGHGLLTSFGSKWHKHRKMITPSFHFNILQDFHEVMNENSAKFMTQLKKASAGDTIIDFQEHA 174
            ||:|:|||...|..|.:||:|:||:||::.|:.:..:|.::....:.:.::....|:.::..:|.
  Rat   125 PWIGYGLLLLNGQTWFQHRRMLTPAFHYDTLKPYVGIMADSVRIMLDKWEQIVGQDSTLEIFQHI 189

  Fly   175 NYLTLDVICDTAMGVPINA-MEQRDSSIVQAFRDMCYNINMRAFHPFKRSNRVFSLTPEFSAYQK 238
            ..:|||.|...|.....:. ::::..|.::|..|:......|..:.|.:::.::||:......:.
  Rat   190 TLMTLDTIMKCAFSQEGSVQLDRKYKSYIKAVEDLNNLSFFRIRNIFHQNDIIYSLSSNGRKARS 254

  Fly   239 TLKTLQDFTYDIIEKRVYALQNGGSKEDHDPSLPRKKMAFLDTLLSSTID-GRPLTRQEIYEEVS 302
            ..:...:.|..:|:.|...||:   :|:......::::.|||.||.:.|: |..|:.:::..||.
  Rat   255 AWQLAHEHTDQVIKSRKAQLQD---EEELQKVKQKRRLDFLDILLFARIENGSSLSDKDLRAEVD 316

  Fly   303 TFMFEGHDTTTSGVSFSVYLLSRHPDVQRKLYREQCEVMGHDMNRSVSFQEIAKMKYLDLFIKEA 367
            ||||||||||.||:|:..|.|:.:|:.|:...:|...::|.  ..|:::.::.||.|..:.||||
  Rat   317 TFMFEGHDTTASGISWIFYALATNPEHQQGCRKEIQSLLGD--GASITWDDLDKMPYTTMCIKEA 379

  Fly   368 QRVYPSVPFIGRYCDKDYDI-NGSIVPKGTTLNLALILLGYNDRIFKDPHHFRPERFEEEKPA-P 430
            .|:||.|..:.|........ :|..:|||.|:.|:...|.:|..::.:|..|.|.||..|... .
  Rat   380 LRIYPPVTAVSRMLSTPVTFPDGRSLPKGITVMLSFYGLHHNPTVWPNPEVFDPYRFAPESSRHS 444

  Fly   431 FEYLPFSAGPRNCIGQKFALLELKTVISKVVRSFEVLPAVDELVSTDGRLNTYLGLAPDEKLKRE 495
            ..:||||.|.|||||::||:.|||..::..:..||:||....:                      
  Rat   445 HSFLPFSGGARNCIGKQFAMNELKVAVALTLLRFELLPDPTRI---------------------- 487

  Fly   496 AGRHKYDPILSAVLTLKSDNGLHLRLRE 523
                   ||....|.|||.||::|||::
  Rat   488 -------PIPIPRLVLKSKNGIYLRLKK 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4e3NP_523527.1 p450 35..468 CDD:278495 127/458 (28%)
Cyp4a8XP_038965258.1 CYP4B-like 72..505 CDD:410771 130/468 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166348487
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9GY
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X23
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.650

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