DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4e3 and Cyp24a1

DIOPT Version :10

Sequence 1:NP_523527.1 Gene:Cyp4e3 / 34291 FlyBaseID:FBgn0015035 Length:526 Species:Drosophila melanogaster
Sequence 2:NP_963966.1 Gene:Cyp24a1 / 25279 RGDID:2462 Length:514 Species:Rattus norvegicus


Alignment Length:503 Identity:121/503 - (24%)
Similarity:213/503 - (42%) Gaps:100/503 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 GPTPVPILGNANRIGKNPAEIL---------STFFDWWYDYGKDNFLFWIGYSSHIVMTNPKQLE 90
            |||..|:||:.       .||.         .|..::...||: .|...:|....:.:.:|..||
  Rat    60 GPTNWPLLGSL-------LEIFWKGGLKKQHDTLAEYHKKYGQ-IFRMKLGSFDSVHLGSPSLLE 116

  Fly    91 YILNSQ----QLIQKSTIYDLLHPWL--------GHGLLTSFGSKWHK-----HRKMITPSFHFN 138
            .:..::    |.::       :.||.        .:||:...|.:|.:     .:|::.|.....
  Rat   117 ALYRTESAHPQRLE-------IKPWKAYRDHRNEAYGLMILEGQEWQRVRSAFQKKLMKPVEIMK 174

  Fly   139 ILQDFHEVMNENSAKFMTQLKK-ASAGDTIIDFQEHANYLTLDVIC----DTAMGVPINAMEQRD 198
            :.:..:||:    |.|:.::.: ......|.|.....|..:.:.||    :...|:.....|:..
  Rat   175 LDKKINEVL----ADFLERMDELCDERGRIPDLYSELNKWSFESICLVLYEKRFGLLQKETEEEA 235

  Fly   199 SSIVQAFRDMCYNINMRAFHP---FKRSNRVFSLTPEFSAYQKTLKTLQDFTYDIIEKRV--YAL 258
            .:.:.|.:.|..........|   .||.|     |..:.|:.....|:.......|:.|:  |:.
  Rat   236 LTFITAIKTMMSTFGKMMVTPVELHKRLN-----TKVWQAHTLAWDTIFKSVKPCIDNRLQRYSQ 295

  Fly   259 QNGGS------KEDHDPSLPRKKMAFLDTLLSSTIDGRPLTRQEIYEEVSTFMFEGHDTTTSGVS 317
            |.|..      ::||                        |:::|:|..|:.......:||.:.:.
  Rat   296 QPGADFLCDIYQQDH------------------------LSKKELYAAVTELQLAAVETTANSLM 336

  Fly   318 FSVYLLSRHPDVQRKLYREQCEVMGHDMNRSVSFQEIAKMKYLDLFIKEAQRVYPSVPFIGRYCD 382
            :.:|.|||:|..||:|.:|...|:..  |::...:::..|.||...:||:.|:.|||||..|..|
  Rat   337 WILYNLSRNPQAQRRLLQEVQSVLPD--NQTPRAEDLRNMPYLKACLKESMRLTPSVPFTTRTLD 399

  Fly   383 KDYDINGSIVPKGTTLNLALILLGYNDRIFKDPHHFRPERF--EEEKPAPFEYLPFSAGPRNCIG 445
            |...:....:||||.|.|...:||.::..|:|.|.|||||:  :|:|..||.:|||..|.|.|||
  Rat   400 KPTVLGEYALPKGTVLTLNTQVLGSSEDNFEDSHKFRPERWLQKEKKINPFAHLPFGIGKRMCIG 464

  Fly   446 QKFALLELKTVISKVVRSFEVLPAVDELVSTDGRLNTYLG-LAPDEKL 492
            ::.|.|:|...:..:::.::::...:|.|..     .:|| |.|..:|
  Rat   465 RRLAELQLHLALCWIIQKYDIVATDNEPVEM-----LHLGILVPSREL 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4e3NP_523527.1 CYP4 68..519 CDD:410721 110/461 (24%)
Cyp24a1NP_963966.1 CYP24A1 90..508 CDD:410738 112/466 (24%)

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