DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4e3 and Cyp4a2

DIOPT Version :9

Sequence 1:NP_523527.1 Gene:Cyp4e3 / 34291 FlyBaseID:FBgn0015035 Length:526 Species:Drosophila melanogaster
Sequence 2:XP_038965182.1 Gene:Cyp4a2 / 24306 RGDID:2479 Length:517 Species:Rattus norvegicus


Alignment Length:544 Identity:152/544 - (27%)
Similarity:257/544 - (47%) Gaps:70/544 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 AVLALLVLPLITLVYFERKASQRRQLLKEFNGPTPVPILGNANRIGKNPAEILSTFFDWWYDYGK 68
            |.|..|.|.|...|.|..:.....:.|::|.. ||...|...|...:...::|:     |.:...
  Rat    22 AFLLSLFLVLFKAVQFYLRRQWLLKALEKFPS-TPSHWLWGHNLKDREFQQVLT-----WVEKFP 80

  Fly    69 DNFLFWI-GYSSHIVMTNPKQLEYILNSQQLIQKSTIYDLLHPWLGHGLLTSFGSKWHKHRKMIT 132
            ...|.|: |.::.:::.:|..::.:|....    ...|..|.||:|:|||...|.||.:||:|:|
  Rat    81 GACLQWLSGSTARVLLYDPDYVKVVLGRSD----PKPYQSLAPWIGYGLLLLNGKKWFQHRRMLT 141

  Fly   133 PSFHFNILQDFHEVMNENSAKFMTQLKKASAGDTIIDFQEHANYLTLDVICDTAMG------VPI 191
            |:||::||:.:.::|.::.:..:.:.:|....|..::...:.:.:|||.:...|..      :.:
  Rat   142 PAFHYDILKPYVKIMADSVSIMLDKWEKLDDQDHPLEIFHYVSLMTLDTVMKCAFSHQGSVQLDV 206

  Fly   192 N------AMEQRDSSIV----QAF--RDMCYNINMRAFHPFKRSNRVFSLTPEFSAYQKTLKTLQ 244
            |      |:|..::.|.    .||  ..:.||::...    :.|.|...:..|.:.....|....
  Rat   207 NSRSYTKAVEDLNNLIFFRVRSAFYGNSIIYNMSSDG----RLSRRACQIAHEHTGSVFLLPAFL 267

  Fly   245 DFTYDIIEKRVYALQNGGSKEDHDPSLPRKKMAFLDTLLSSTI-DGRPLTRQEIYEEVSTFMFEG 308
            ..:..:|:.|...|||   :|:...:..::.:.|||.||.:.: ||:.|:.:::..||.||||||
  Rat   268 SLSDGVIKTRKAQLQN---EEELQKARKKRHLDFLDILLFAKMEDGKSLSDEDLRAEVDTFMFEG 329

  Fly   309 HDTTTSGVSFSVYLLSRHPDVQRKLYREQCEVMGHDMNRSVSFQEIAKMKYLDLFIKEAQRVYPS 373
            ||||.||:|:..|.|:.||:.|.:...|...::|.  ..||::..:.:|.|..:.||||.|:|..
  Rat   330 HDTTASGISWVFYALATHPEHQERCREEVQSILGD--GTSVTWDHLDQMPYTTMCIKEALRLYSP 392

  Fly   374 VPFIGRYCDKDYDI-NGSIVPKGTTLNLALILLGYNDRIFKDPHHFRPERFEEEKPA-PFEYLPF 436
            ||.:.|........ :|..:|||..:.:.:..|.:|...:.:|..|.|.||..:.|. ...||||
  Rat   393 VPSVSRELSSPVTFPDGRSIPKGIRVTILIYGLHHNPSYWPNPKVFDPSRFSPDSPRHSHAYLPF 457

  Fly   437 SAGPRNCIGQKFALLELKTVISKVVRSFEVLPAVDELVSTDGRLNTYLGLAPDEKLKREAGRHKY 501
            |.|.|||||::||:.|||..::..:..||:||....:                            
  Rat   458 SGGARNCIGKQFAMNELKVAVALTLLRFELLPDPTRI---------------------------- 494

  Fly   502 DPILSAVLTLKSDNGLHLRLRERR 525
             |:....|.|||.||:||||::.|
  Rat   495 -PVPMPRLVLKSKNGIHLRLKKLR 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4e3NP_523527.1 p450 35..468 CDD:278495 129/454 (28%)
Cyp4a2XP_038965182.1 CYP4B-like 69..512 CDD:410771 135/489 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166348475
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9GY
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X23
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.650

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