DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4e3 and cyp-13A1

DIOPT Version :9

Sequence 1:NP_523527.1 Gene:Cyp4e3 / 34291 FlyBaseID:FBgn0015035 Length:526 Species:Drosophila melanogaster
Sequence 2:NP_001369869.1 Gene:cyp-13A1 / 188361 WormBaseID:WBGene00011677 Length:519 Species:Caenorhabditis elegans


Alignment Length:523 Identity:129/523 - (24%)
Similarity:225/523 - (43%) Gaps:101/523 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 WLAVLALLVLPLITLVYFERKASQRRQLLKEFNGPTPVPILG-NANRIGKN---PAEILSTFFDW 62
            |....:.:.:.:.:...::....:||.::    ||...|:|| ..|.:..|   |.:..    :|
 Worm     5 WFPWFSAIFVAVFSYYIWQWTFWRRRGVV----GPMGFPVLGVFLNSLDNNFPFPLQCR----EW 61

  Fly    63 WYDYGKDNFLFWIGYSSHIVMTNPKQLEYILNSQQLIQKSTIYDLLH-----PWLGH-------G 115
            ...:|| .:.|..|....:|:::|:.:..:..:|        ||..:     |..|.       .
 Worm    62 TKKFGK-IYGFTEGTLKTLVISDPELVHEVFVTQ--------YDNFYGRKRNPIQGDSEKEKRTN 117

  Fly   116 LLTSFGSKWHKHRKMITPSFHFNILQDFHEVMNENSAKFMTQLKKASAGDTIIDFQEHANYLTLD 180
            |..:.|.:|.:.|.:.:|:|..:.|:..::.:.:::.:.:..::|.|||...||..:.....|||
 Worm   118 LFAAQGFRWKRLRAISSPTFSNSSLRKLYQTVEDSALELLRHIEKQSAGGKQIDMLKFYQEFTLD 182

  Fly   181 VICDTAMGVPINAMEQRDSSIVQAFRDMCYNINMRAFH-PFKRSNRVFSLTPEF------SAYQK 238
            ||...|||       |.||   |.|::....|..:.|. .|.:...:..:.|.|      ....|
 Worm   183 VIGRIAMG-------QTDS---QMFKNPIMPIVSKLFQGNFAKLFLIGGIFPTFLVEIIRQILLK 237

  Fly   239 TLKT-----LQDFTYDIIEKRVYALQNGGSKEDHDPSLPRKKMA-FLDTLL-------------- 283
            .||.     :.:.|.|.|..|:..     .:||....:...:.| |:|..|              
 Worm   238 NLKVGSFRKINEITLDAIHNRIKQ-----REEDQKNGIEIGEPADFIDLFLDAKAEDVEHFGENN 297

  Fly   284 -----SSTIDGRPLTRQEIYEEVSTFMFEGHDTTTSGVSFSVYLLSRHPDVQRKLYRE---QCEV 340
                 |:|...|.||.:||..:.:.|:..|.|||...:|::.|||:.||::|:||..|   :|. 
 Worm   298 GDFSKSTTYTNRQLTTEEIVGQCTVFLIAGFDTTALSLSYATYLLATHPEIQKKLQEEVNRECP- 361

  Fly   341 MGHDMNRSVSFQEIAKMKYLDLFIKEAQRVYPSVPFI-GRYCDKDYDINGSIVPKGTTLNLALIL 404
                 |..|:..:::|:||::...|||.|:||...|. .|.|.::..:....|..||.:.:....
 Worm   362 -----NPEVTIDQLSKLKYMECVFKEALRLYPLGAFANSRRCMRNTKLGNMKVEVGTMIQVDTWT 421

  Fly   405 LGYNDRIF-KDPHHFRPERFEE-------EKPAPFEYLPFSAGPRNCIGQKFALLELKTVISKVV 461
            |..:..|: .|...|:|||::.       :|..   |:||..|||.|||.:.|.:|.|.::..::
 Worm   422 LHTDPNIWGDDAEDFKPERWQTPNSDQIYQKSG---YIPFGLGPRQCIGMRLAYMEEKILLVHIL 483

  Fly   462 RSF 464
            |.|
 Worm   484 RKF 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4e3NP_523527.1 p450 35..468 CDD:278495 126/490 (26%)
cyp-13A1NP_001369869.1 CYP3A-like 64..510 CDD:410678 117/456 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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