DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4e3 and cyp-25A2

DIOPT Version :9

Sequence 1:NP_523527.1 Gene:Cyp4e3 / 34291 FlyBaseID:FBgn0015035 Length:526 Species:Drosophila melanogaster
Sequence 2:NP_497776.2 Gene:cyp-25A2 / 175495 WormBaseID:WBGene00007964 Length:502 Species:Caenorhabditis elegans


Alignment Length:485 Identity:146/485 - (30%)
Similarity:232/485 - (47%) Gaps:44/485 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 AVLALLVLPLITLVYFERKASQRRQLLKEFNGPTPVPILGNANRIGKNPAEILSTFFDWWYD--- 65
            ::|.|||..:|.:::..|:..:.|:.: ...||.|...:||..:|.....::.....:.|::   
 Worm     8 SILILLVSFIIYILFARREQFKLREKI-GLTGPEPHWFMGNLKQIVDRKEKLGYDDSNKWFNELH 71

  Fly    66 --YGKDNFLFWIGYSSHIVMTNPKQLE--YILN----SQQLIQKSTIYDLLHPWLGHGLL-TSFG 121
              || :.|..:.|...:||::|.:.::  :|.|    |.:::  ..|:|  ...|...|| .::.
 Worm    72 KQYG-ETFGIYFGAQMNIVLSNEEDIKEVFIKNFSNFSDRIV--PPIFD--SNQLNQSLLQNTYA 131

  Fly   122 SKWHKHRKMITPSFHFNILQDFHEVMNENSAKFMTQLK-KASAG---DTIIDFQEHANYLTLDVI 182
            :.|...|..|.|.|....::...|.::.....|:..|: |||:|   |...|||.    ||||||
 Worm   132 TGWKHTRSAIAPIFSTGKMKAMQETIHSKVDLFLDILREKASSGQKWDIYEDFQG----LTLDVI 192

  Fly   183 CDTAMGVPINAMEQRDSSIVQAFRDMCYNINMRAFHPFKRSNRVFSLTPEFSAYQKTLKTLQDFT 247
            ...|..:..|....|:.......|....||::|.......|..:..|.|.:.|..| ...|.|..
 Worm   193 GKCAFAIDSNCQRDRNDVFYVNARKFIANIDIRHSKVIAASFILPELAPLWRALYK-YTPLADAE 256

  Fly   248 YDIIE--KRVYALQNGGSKEDHDPSLPRKKMAFLDTLLSSTID-GRPLTRQEIYEEVSTFMFEGH 309
            ..::|  ..||..:.||...|        .:..|..||:...| .:|:|:||:.|....|:..|:
 Worm   257 IPLVEGLSNVYERRRGGEGSD--------SVDLLKLLLNREDDKSKPMTKQEVIENCFAFLLAGY 313

  Fly   310 DTTTSGVSFSVYLLSRHPDVQRKLYREQCEVMGHDMNRSVSFQEIAKMKYLDLFIKEAQRVYPSV 374
            :||::.:::..||||::|:||:|||.   |:|....|..:::..|..|||||...||..|.||.|
 Worm   314 ETTSTAMTYCSYLLSKYPNVQQKLYE---EIMEAKENGGLTYDSIHNMKYLDYVYKETLRCYPPV 375

  Fly   375 -PFIGRYCDKDYDINGSIVPKGTTLNLALILLGYNDRIFKDPHHFRPERFE--EEKPAPFEYLPF 436
             .||.|.|..|..|.|...|||:.:......:..|...:..|..|.|||||  |||.:..:::||
 Worm   376 IHFINRRCLADITIRGQFYPKGSVVTCLPHTVHLNPENWDSPEEFHPERFENWEEKSSSLKWIPF 440

  Fly   437 SAGPRNCIGQKFALLELKTVISKVVRSFEV 466
            ..|||.|:|.:||.:|.||.|.|::.:||:
 Worm   441 GVGPRYCVGMRFAEMEFKTTIVKLLDTFEL 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4e3NP_523527.1 p450 35..468 CDD:278495 139/454 (31%)
cyp-25A2NP_497776.2 p450 38..498 CDD:278495 139/454 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.