DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4e3 and Cyp26a1

DIOPT Version :10

Sequence 1:NP_523527.1 Gene:Cyp4e3 / 34291 FlyBaseID:FBgn0015035 Length:526 Species:Drosophila melanogaster
Sequence 2:NP_569092.2 Gene:Cyp26a1 / 154985 RGDID:620161 Length:497 Species:Rattus norvegicus


Alignment Length:425 Identity:102/425 - (24%)
Similarity:179/425 - (42%) Gaps:81/425 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 YSSHI-------VMTNPKQLEYILNSQQLIQKSTIYDLLHPW-------LGHGLLTSFGSKWHKH 127
            |.:|:       ||........:|...:|:.       :| |       ||.|.|::.....||.
  Rat    79 YKTHLFGRPTVRVMGADNVRRILLGEHRLVS-------VH-WPASVRTILGAGCLSNLHDSSHKQ 135

  Fly   128 R-KMITPSFHFNILQDFHEVMNENSAKFMTQLKKASAGDTIIDFQEHANYLTLDVICDTAMGV-- 189
            | |:|..:|:...||.:..|:.|..:..:.|.  .|.|:..:........|...:.....:|.  
  Rat   136 RKKVIMQAFNREALQCYVPVIAEEVSGCLEQW--LSCGERGLLVYPEVKRLMFRIAMRILLGCEP 198

  Fly   190 -PINAMEQRDSSIVQAFRDMCYNINMRAFHPFKRSNRVFSLTPE--FSAYQKTLKTLQDFTYDII 251
             |....|. :..:|:||.:|..|:              |||..:  ||...:.:|. ::..:..|
  Rat   199 GPAGGGED-EQQLVEAFEEMTRNL--------------FSLPIDVPFSGLYRGVKA-RNLIHARI 247

  Fly   252 EKRVYA----LQ----NGGSKEDHDPSLPRKKMAFLDTLLSSTID-GRPLTRQEIYEEVSTFMFE 307
            |:.:.|    ||    :.|.|:            .|..|:..:.: |..|..|.:.:..:..:|.
  Rat   248 EENIRAKIRRLQAAEPDAGCKD------------ALQLLIEHSWERGERLDMQALKQSSTELLFG 300

  Fly   308 GHDTTTSGVSFSVYLLSRHPDVQRKLYREQCEVMG-----HDMNRSVSFQEIAKMKYLDLFIKEA 367
            ||:||.|..:..:..|..:|.|.:|: ||:.:..|     |..:: :..:.:.::||:...|||.
  Rat   301 GHETTASAATSLITYLGLYPHVLQKV-REEIKSKGLLCKSHHEDK-LDMETLEQLKYIGCVIKET 363

  Fly   368 QRVYPSVPFIGRYCDKDYDINGSIVPKGTTLNLALILLGYND--RIFKDPHHFRPERF---EEEK 427
            .|:.|.||...|...|.:::||..:|||  .|:...:...:|  ..|.:...|.|:||   ..|.
  Rat   364 LRLNPPVPGGFRVALKTFELNGYQIPKG--WNVIYSICDTHDVADSFTNKEEFNPDRFTSLHPED 426

  Fly   428 PAPFEYLPFSAGPRNCIGQKFALLELKTVISKVVR 462
            .:.|.::||..|.|:|:|::||.:.||....::.|
  Rat   427 TSRFSFIPFGGGLRSCVGKEFAKILLKIFTVELAR 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4e3NP_523527.1 CYP4 68..519 CDD:410721 102/425 (24%)
Cyp26a1NP_569092.2 cytochrome_P450 55..490 CDD:477761 102/425 (24%)

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