DRSC/TRiP Functional Genomics Resources

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Protein Alignment ZNF404 and gli2

DIOPT Version :9

Sequence 1:NP_001028891.2 Gene:ZNF404 / 342908 HGNCID:19417 Length:552 Species:Homo sapiens
Sequence 2:XP_002943329.3 Gene:gli2 / 100498653 XenbaseID:XB-GENE-481810 Length:1474 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZNF404NP_001028891.2 KRAB 6..>51 CDD:214630
KRAB 6..45 CDD:279668
COG5048 106..510 CDD:227381
C2H2 Zn finger 133..153 CDD:275368
C2H2 Zn finger 161..181 CDD:275368
C2H2 Zn finger 189..209 CDD:275368
C2H2 Zn finger 217..237 CDD:275368
C2H2 Zn finger 245..265 CDD:275368
C2H2 Zn finger 273..293 CDD:275368
zf-H2C2_2 285..310 CDD:290200
C2H2 Zn finger 301..321 CDD:275368
zf-H2C2_2 314..336 CDD:290200
C2H2 Zn finger 329..349 CDD:275368
C2H2 Zn finger 357..377 CDD:275368
zf-H2C2_2 370..393 CDD:290200
C2H2 Zn finger 385..405 CDD:275368
CpXC 413..>458 CDD:291051
C2H2 Zn finger 413..433 CDD:275368
C2H2 Zn finger 441..461 CDD:275368
C2H2 Zn finger 469..489 CDD:275368
zf-H2C2_2 482..506 CDD:290200
C2H2 Zn finger 497..517 CDD:275368
C2H2 Zn finger 525..545 CDD:275368
gli2XP_002943329.3 FOXP-CC 405..>439 CDD:406546
C2H2 Zn finger 441..463 CDD:275368
SFP1 <465..555 CDD:227516
C2H2 Zn finger 471..493 CDD:275368
C2H2 Zn finger 501..524 CDD:275368
C2H2 Zn finger 532..553 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
NCBI 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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