DRSC/TRiP Functional Genomics Resources

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Protein Alignment pelo and DOM34

DIOPT Version :9

Sequence 1:NP_476982.1 Gene:pelo / 34286 FlyBaseID:FBgn0011207 Length:395 Species:Drosophila melanogaster
Sequence 2:NP_014397.1 Gene:DOM34 / 855731 SGDID:S000004946 Length:386 Species:Saccharomyces cerevisiae


Alignment Length:391 Identity:130/391 - (33%)
Similarity:230/391 - (58%) Gaps:13/391 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKLLGKYVDKGMQGN--VTLVPEESEDMWHAYNLIAKGDSVRSTTIRKVQNETATGSSTSSRVRT 63
            ||::....|...:|.  :||:||:.||::..|.::.|.|.:  ...:|..::........|....
Yeast     1 MKVISLKKDSFNKGGAVITLLPEDKEDLFTVYQIVDKDDEL--IFKKKFTSKLDEAGKKKSTDLV 63

  Fly    64 TLTIAVESIDFDTQACVLRLKGRNIEE-----NQYVKMGAYHTLDLELNRKFELRKPEWDTIALE 123
            .|.|.|.|.|||.:...|:.||..:.:     |..:.:|.|.:..|:....|.:.|..::....:
Yeast    64 KLKIKVISEDFDMKDEYLKYKGVTVTDESGASNVDIPVGKYLSFTLDYVYPFTIIKQNFNKFMQK 128

  Fly   124 RIEMACDPTQSADVAAVVMQEGLAHVCLITASMTLVRSKIEVSIPRKRKGS-VQQHEKGLAKFYE 187
            .:..||:....:|.||||:|||:|||||:|:|.|:::.|||.|:|:|::.: |.:.::...|||:
Yeast   129 LLNEACNIEYKSDTAAVVLQEGIAHVCLVTSSSTILKQKIEYSMPKKKRTTDVLKFDEKTEKFYK 193

  Fly   188 QVMQSILRHVNFDVVKCVLIASPGFVRDQFYDYMFQQAVKMDYKLLLDNKSKFMLVHASSGFKHS 252
            .:..::.:.:|||.:|.:::.||||......|.:||.|.:...|.:||||..|.:.|.|:|:...
Yeast   194 AIYSAMKKDLNFDKLKTIILCSPGFYAKILMDKIFQYAEEEHNKKILDNKGMFFIAHCSTGYLQG 258

  Fly   253 LREILQDPAVLAKMSDTKAAGEVKALEQFYMMLQCEPAKAFYGKKHVLQAAESQAIETLLISDNL 317
            :.|:|::|...:|:.|||.:.|:..:::|.:.|..:..||:||:|.|::|||..||..||::|.:
Yeast   259 INEVLKNPLYASKLQDTKYSKEIMVMDEFLLHLNKDDDKAWYGEKEVVKAAEYGAISYLLLTDKV 323

  Fly   318 FRCQDVSLRKEYVNLVESIRDAGGEVKIFSSMHISGEQLAQLTGIAALLRFPMPELEDSDDDDDE 382
            ....:::.|:||:.|::|:...||:..:.|::|..||:|.||||||.:|::|:|:|   |:||.|
Yeast   324 LHSDNIAQREEYLKLMDSVESNGGKALVLSTLHSLGEELDQLTGIACILKYPLPDL---DEDDGE 385

  Fly   383 D 383
            :
Yeast   386 E 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
peloNP_476982.1 PelA 1..371 CDD:224454 124/377 (33%)
eRF1_1 1..128 CDD:281462 31/133 (23%)
eRF1_2 136..268 CDD:281463 51/132 (39%)
eRF1_3 271..370 CDD:281464 36/98 (37%)
DOM34NP_014397.1 pelota 4..376 CDD:129217 121/373 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157346719
Domainoid 1 1.000 109 1.000 Domainoid score I1415
eggNOG 1 0.900 - - E1_COG1537
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 239 1.000 Inparanoid score I694
Isobase 1 0.950 - 0 Normalized mean entropy S784
OMA 1 1.010 - - QHG62163
OrthoFinder 1 1.000 - - FOG0003168
OrthoInspector 1 1.000 - - oto100077
orthoMCL 1 0.900 - - OOG6_101450
Panther 1 1.100 - - LDO PTHR10853
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R330
SonicParanoid 1 1.000 - - X2563
TreeFam 1 0.960 - -
1514.740

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