DRSC/TRiP Functional Genomics Resources

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Protein Alignment pelo and SPCC18B5.06

DIOPT Version :9

Sequence 1:NP_476982.1 Gene:pelo / 34286 FlyBaseID:FBgn0011207 Length:395 Species:Drosophila melanogaster
Sequence 2:NP_587936.1 Gene:SPCC18B5.06 / 2539371 PomBaseID:SPCC18B5.06 Length:390 Species:Schizosaccharomyces pombe


Alignment Length:383 Identity:191/383 - (49%)
Similarity:280/383 - (73%) Gaps:0/383 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKLLGKYVDKGMQGNVTLVPEESEDMWHAYNLIAKGDSVRSTTIRKVQNETATGSSTSSRVRTTL 65
            |||:.|.::|...|.:|:.|||.|||||.||::..||.::::|:|:|....||||::.|||...|
pombe     1 MKLIQKNIEKNGSGWITMCPEEPEDMWHLYNILQVGDQLKASTVRRVVKVGATGSTSGSRVVMKL 65

  Fly    66 TIAVESIDFDTQACVLRLKGRNIEENQYVKMGAYHTLDLELNRKFELRKPEWDTIALERIEMACD 130
            .|.||::||||:|..|.:|||..|.:..||||:||||||||:|.|.|.|.|||..||:|::.||:
pombe    66 RILVENMDFDTKAAQLHIKGRTTEYHPEVKMGSYHTLDLELHRNFTLYKNEWDAFALDRVDAACN 130

  Fly   131 PTQSADVAAVVMQEGLAHVCLITASMTLVRSKIEVSIPRKRKGSVQQHEKGLAKFYEQVMQSILR 195
            |:::|::.|||:.||||::||||..||::|.:|:..|||||:|....::|||.|||:.|.|||..
pombe   131 PSRNAEIGAVVLDEGLANICLITDYMTILRQRIDQVIPRKRRGDSSAYQKGLDKFYDSVFQSINS 195

  Fly   196 HVNFDVVKCVLIASPGFVRDQFYDYMFQQAVKMDYKLLLDNKSKFMLVHASSGFKHSLREILQDP 260
            ..:||.:|.|::||||||....|||:|..|||:|.|.::.:|:||:::|:|:|..|||.|||:||
pombe   196 EFDFDKLKVVILASPGFVARGLYDYIFSMAVKLDLKQIVKSKNKFVILHSSTGHIHSLNEILKDP 260

  Fly   261 AVLAKMSDTKAAGEVKALEQFYMMLQCEPAKAFYGKKHVLQAAESQAIETLLISDNLFRCQDVSL 325
            ||.:|::|||...|::.|.:||.::..:..||:||..|||:|.|..||..|||||:|||..|::.
pombe   261 AVESKLADTKYVQEIRVLNKFYDVMNEDDRKAWYGPNHVLKAFELGAIGELLISDSLFRSSDIAT 325

  Fly   326 RKEYVNLVESIRDAGGEVKIFSSMHISGEQLAQLTGIAALLRFPMPELEDSDDDDDED 383
            ||::|:|||.:::....|.||||:|.||:||..|:||||:|.:|:.|.:.|:|::||:
pombe   326 RKKWVSLVEGVKEINCPVYIFSSLHESGKQLDLLSGIAAILTYPVDEEDISEDEEDEE 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
peloNP_476982.1 PelA 1..371 CDD:224454 186/369 (50%)
eRF1_1 1..128 CDD:281462 65/126 (52%)
eRF1_2 136..268 CDD:281463 67/131 (51%)
eRF1_3 271..370 CDD:281464 46/98 (47%)
SPCC18B5.06NP_587936.1 PelA 1..370 CDD:224454 185/368 (50%)
eRF1_1 1..128 CDD:281462 65/126 (52%)
eRF1_2 136..268 CDD:281463 67/131 (51%)
eRF1_3 271..370 CDD:281464 46/98 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 142 1.000 Domainoid score I1193
eggNOG 1 0.900 - - E1_COG1537
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6835
Inparanoid 1 1.050 390 1.000 Inparanoid score I403
OMA 1 1.010 - - QHG62163
OrthoFinder 1 1.000 - - FOG0003168
OrthoInspector 1 1.000 - - oto101811
orthoMCL 1 0.900 - - OOG6_101450
Panther 1 1.100 - - LDO PTHR10853
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R330
SonicParanoid 1 1.000 - - X2563
TreeFam 1 0.960 - -
1413.860

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