DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pka-C1 and prkg1b

DIOPT Version :9

Sequence 1:NP_476977.1 Gene:Pka-C1 / 34284 FlyBaseID:FBgn0000273 Length:353 Species:Drosophila melanogaster
Sequence 2:XP_009304717.2 Gene:prkg1b / 566430 ZFINID:ZDB-GENE-080225-40 Length:684 Species:Danio rerio


Alignment Length:342 Identity:149/342 - (43%)
Similarity:208/342 - (60%) Gaps:17/342 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGNNATTSNKKVDAAETVKEFLEQAKEEFEDKWRRNPTNTAALDDFERIKTLGTGSFGRVMIVQH 65
            :|.....|||..|.|..      :||.|.|:.:..|    ..|.||..|.|||.|.||||.:||.
Zfish   338 IGGLDDVSNKGYDDAGA------KAKYEAENAFFSN----LKLVDFNIIDTLGVGGFGRVELVQL 392

  Fly    66 K--PTKDYYAMKILDKQKVVKLKQVEHTLNEKRILQAIQFPFLVSLRYHFKDNSNLYMVLEYVPG 128
            |  .||. :|||||.|:.:|..:|.||..:||:|:|.....|:|.|...|||:..|||::|...|
Zfish   393 KSEETKT-FAMKILKKRHIVDTRQQEHIRSEKQIMQEAHSDFIVRLYRTFKDSKYLYMLMEACLG 456

  Fly   129 GEMFSHLRKVGRFSEPHSRFYAAQIVLAFEYLHYLDLIYRDLKPENLLIDSQGYLKVTDFGFAKR 193
            ||:::.||..|.|.:..:|||.|.:|.||.|||...:||||||||||::|.:||.|:.||||||:
Zfish   457 GELWTILRDRGSFEDSTTRFYTACVVEAFAYLHSKGIIYRDLKPENLILDHRGYAKLVDFGFAKK 521

  Fly   194 V--KGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLVYEMAAGYPPFFADQPIQIYEKIVSG 256
            :  ..:|||.||||||:||||||:||::.:.|:|:||:|:||:..|.|||....|::.|..|:.|
Zfish   522 IGFGKKTWTFCGTPEYVAPEIILNKGHDISADYWSLGILMYELLTGSPPFSGPDPMKTYNIILRG 586

  Fly   257 --KVRFPSHFGSDLKDLLRNLLQVDLTKRYGNLKAGVNDIKNQKWFASTDWIAIFQKKIEAPFIP 319
              .:.||.....:..:|::.|.:.:.::|.||||.||.||:..|||...:|..:.:..:..|.||
Zfish   587 IDMIEFPKKITKNAGNLIKKLCRDNPSERLGNLKNGVKDIQKHKWFEGFNWEGLRKGTLIPPIIP 651

  Fly   320 RCKGPGDTSNFDDYEEE 336
            ....|.||||||.:.|:
Zfish   652 DVASPTDTSNFDSFPED 668

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pka-C1NP_476977.1 STKc_PKA 44..333 CDD:271111 136/294 (46%)
prkg1bXP_009304717.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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