DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pka-C1 and camk1

DIOPT Version :9

Sequence 1:NP_476977.1 Gene:Pka-C1 / 34284 FlyBaseID:FBgn0000273 Length:353 Species:Drosophila melanogaster
Sequence 2:NP_001016269.1 Gene:camk1 / 549023 XenbaseID:XB-GENE-1017139 Length:383 Species:Xenopus tropicalis


Alignment Length:378 Identity:110/378 - (29%)
Similarity:193/378 - (51%) Gaps:67/378 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 EEFEDKWRRNPTNTAALDDFERIKTLGTGSFGRVMIVQHKPTKDYYAMKILDKQKVV-KLKQVEH 90
            :|....|::...:...:.:|..:  ||||:|..|::.:.|.|:...|:|.:.|:.:. |...:| 
 Frog     4 DEDGPSWKKRAEDIRDIYEFREV--LGTGAFSEVVLAEEKKTQKLVAIKCIPKKALEGKETSIE- 65

  Fly    91 TLNEKRILQAIQFPFLVSLRYHFKDNSNLYMVLEYVPGGEMFSHLRKVGRFSEPHSRFYAAQIVL 155
              ||..:|:.|:...:|||...::..|:||::::.|.|||:|..:.:.|.::|..:.....||:.
 Frog    66 --NEIAVLRKIKHANIVSLEDIYESRSHLYLIMQLVSGGELFDRIVEKGFYTEKDASQLIKQILD 128

  Fly   156 AFEYLHYLDLIYRDLKPENLL---IDSQGYLKVTDFGFAKRVKGR---TWTLCGTPEYLAPEIIL 214
            |.:|||.:.:::|||||||||   ||....:.::|||.:| ::|.   ..|.||||.|:|||::.
 Frog   129 AVKYLHDMGIVHRDLKPENLLYYSIDEDSKIMISDFGLSK-IEGSGSVMSTACGTPGYVAPEVLA 192

  Fly   215 SKGYNKAVDWWALGVLVYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFGSDL----KDLLRNL 275
            .|.|:||||.|::||:.|.:..|||||:.:...:::|:|:..:..|.|.:..|:    ||.:::|
 Frog   193 QKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIQHL 257

  Fly   276 LQVDLTKRY------------------GNLKAGVNDIKNQKWFASTDWIAIF--------QKKIE 314
            ::.|..||.                  .|:...|:: :.:|.||.:.|...|        .:|::
 Frog   258 MEKDPNKRNTCDQALQHPWIAGDTALDKNIHESVSE-QIRKNFAKSRWKQAFNATAVVRHMRKLQ 321

  Fly   315 -----------APFIPRCKG----PGDTSNFDDYEEEALRISSTEKCAKEFAE 352
                       .|..| |.|    |||  |...:.|     |..:.|:.:.:|
 Frog   322 LGTSQEGPGQTTPTSP-CHGNLLMPGD--NHGSHSE-----SCQDCCSPKSSE 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pka-C1NP_476977.1 STKc_PKA 44..333 CDD:271111 104/340 (31%)
camk1NP_001016269.1 STKc_CaMKI_alpha 17..279 CDD:271069 88/267 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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