DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pka-C1 and prkacab

DIOPT Version :9

Sequence 1:NP_476977.1 Gene:Pka-C1 / 34284 FlyBaseID:FBgn0000273 Length:353 Species:Drosophila melanogaster
Sequence 2:NP_001003470.1 Gene:prkacab / 445076 ZFINID:ZDB-GENE-040801-208 Length:351 Species:Danio rerio


Alignment Length:353 Identity:283/353 - (80%)
Similarity:319/353 - (90%) Gaps:2/353 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGNNATTSNKKVDAAETVKEFLEQAKEEFEDKWRRNPTNTAALDDFERIKTLGTGSFGRVMIVQH 65
            |||  |.:.|:.:..|:|||||..|||:|..||.....|||.|:||:|:||||||||||||:|:|
Zfish     1 MGN--TPAAKRGNEMESVKEFLAFAKEDFLRKWENPAQNTACLEDFDRLKTLGTGSFGRVMLVRH 63

  Fly    66 KPTKDYYAMKILDKQKVVKLKQVEHTLNEKRILQAIQFPFLVSLRYHFKDNSNLYMVLEYVPGGE 130
            :.|..:||||||:|||||||||:||||||||||||:.|||||.|.|.||||:|||||::||.|||
Zfish    64 RETGQHYAMKILNKQKVVKLKQIEHTLNEKRILQAVSFPFLVRLEYSFKDNTNLYMVMQYVQGGE 128

  Fly   131 MFSHLRKVGRFSEPHSRFYAAQIVLAFEYLHYLDLIYRDLKPENLLIDSQGYLKVTDFGFAKRVK 195
            ||||||::|||||||:||||:||||.|||||.||||||||||||||||.|||::|||||||||||
Zfish   129 MFSHLRRIGRFSEPHARFYASQIVLTFEYLHALDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 193

  Fly   196 GRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLVYEMAAGYPPFFADQPIQIYEKIVSGKVRF 260
            |||||||||||||||||||||||||||||||||||:|||||||||||||||||||||||||||||
Zfish   194 GRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLMYEMAAGYPPFFADQPIQIYEKIVSGKVRF 258

  Fly   261 PSHFGSDLKDLLRNLLQVDLTKRYGNLKAGVNDIKNQKWFASTDWIAIFQKKIEAPFIPRCKGPG 325
            ||||.|||||||||||||||||||||||.||||||..|||::||||||:|:::||||:|:|:|||
Zfish   259 PSHFSSDLKDLLRNLLQVDLTKRYGNLKNGVNDIKGHKWFSTTDWIAIYQRRVEAPFVPKCRGPG 323

  Fly   326 DTSNFDDYEEEALRISSTEKCAKEFAEF 353
            |||||||||||.:|:|.|||||||||||
Zfish   324 DTSNFDDYEEEEIRVSFTEKCAKEFAEF 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pka-C1NP_476977.1 STKc_PKA 44..333 CDD:271111 244/288 (85%)
prkacabNP_001003470.1 PTZ00263 41..351 CDD:140289 261/309 (84%)
STKc_PKA 42..331 CDD:271111 244/288 (85%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 470 1.000 Domainoid score I429
eggNOG 1 0.900 - - E1_KOG0616
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 607 1.000 Inparanoid score I891
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D277423at33208
OrthoFinder 1 1.000 - - FOG0000539
OrthoInspector 1 1.000 - - otm25157
orthoMCL 1 0.900 - - OOG6_100326
Panther 1 1.100 - - O PTHR24353
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R632
SonicParanoid 1 1.000 - - X747
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1312.860

Return to query results.
Submit another query.