DRSC/TRiP Functional Genomics Resources

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Protein Alignment Apoltp and vtg7

DIOPT Version :9

Sequence 1:NP_995670.2 Gene:Apoltp / 34283 FlyBaseID:FBgn0032136 Length:4333 Species:Drosophila melanogaster
Sequence 2:NP_001096141.1 Gene:vtg7 / 559856 ZFINID:ZDB-GENE-001201-6 Length:1358 Species:Danio rerio


Alignment Length:1369 Identity:255/1369 - (18%)
Similarity:475/1369 - (34%) Gaps:375/1369 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   155 LRFAFHDGLISEVCPQEQETPWVLNIKKGILSAFQNTMMRFDVDANTTETDVSGQCQVQYAL-ED 218
            ::|.:.:|::.:|......:|.|:|:.:|||:..|..:..........|....|.|:..|.: ||
Zfish   107 IKFEYANGVVGKVFAPAGVSPTVMNLYRGILNILQLNLKTTQNIYELQEAGAQGVCRTHYVINED 171

  Fly   219 TDSSYVTIRKTKDINSCRQRYATHSVLQTTPYTFRDDKTIWPILKSQSHCNLTIDNNVYKEIKCL 283
            ..::::.:.|:||::.|::|......|..|              :|...|.        :.:|.|
Zfish   172 PKTNHIIVTKSKDLSHCQERIMKDVGLAYT--------------ESCPECT--------ERVKSL 214

  Fly   284 -ET----HLLVPFSNASSGALTTSTSRLKLDGVES-YSAGEFLE-QNPELVERRATLVF---DHT 338
             ||    :::.|   |.:|||....:      ||. |....|.| ....::|.:.||.|   :.|
Zfish   215 IETATYNYIMKP---ADNGALIAEAT------VEEVYQFSPFNEIHGAAMMEAKQTLAFVEIEKT 270

  Fly   339 PAVKPSHD-------EIKAARELL---VEMCRVGFPNIQREFIDVFTNFLQTSKS-------LDY 386
            |.|....|       :.:.|.|:|   :::.::.  :...:.::|.|:.:..:|.       |.:
Zfish   271 PVVPIKADYMPRGSLQYEFATEILQTPIQLMKIS--DATAQIVEVLTHLVANNKDMVHDDAPLKF 333

  Fly   387 KTLSVLLQRSASTCEQ-------------GRNHLLESLPFIGSTASYKVMRDQII-NEKLTKQMA 437
            ..|..||:  .||.::             .|..||::||.:|:....|.::::.: .|..|.:..
Zfish   334 VQLVQLLR--LSTLDKFEAIWAQFKNKPVYRRWLLDALPAVGTPVIIKFIKEKFLAGEFTTPEFI 396

  Fly   438 HDWMTALSFITRPDEETLETFHSILEYAK----NRLDAEYTLGATAVVHSFCKHHEACEENLRVQ 498
            ...:.||..:| .|.||::..:|:..:.|    ..|.....||..:::...|....:|...|  .
Zfish   397 QTLVVALQMVT-ADLETIQMTYSLATHEKFTTIPALREVVMLGYGSLIAKHCVAVPSCPAEL--L 458

  Fly   499 QIINLLETEFLNLYNLFKGERRTRERMVILLKGLGNIGVVSSAFAEQLQWIIR--------EDEA 555
            :.|:.:..|.::..::        ..:.:.||.:||.|..||     |:.|::        .:..
Zfish   459 KPIHEITAEAISKNDI--------PEITLALKVMGNAGHPSS-----LKPIMKLLPGLRTAANAL 510

  Fly   556 PVDIRLHGILAFRRVDCARHR-------SYFLDNYGNYTLNSELRIYSYLQAMRC-PDYISVGVI 612
            |:.:::..|||.|.:.....:       ...||.    .|:.|:|:.:.:..... |....|..:
Zfish   511 PIKVQVDAILALRNIAKKEPKLVQPIALQLVLDR----ALHPEVRMVACIVLFEAKPSAALVSSL 571

  Fly   613 KSILEHEEINQVGSFVWSHLTNLAKSNSPVRIEAQGL------LLN---DELSERFKMDIRKFSR 668
            ...|..|....|.||.:||:.:|.:..:|......|.      |:|   |.|:.|:.   |.|..
Zfish   572 AGALRIEPNMHVASFAYSHIK
SLTRITAPDMASVAGAANVAIKLMNRKLDRLNYRYS---RAFHM 633

  Fly   669 NYEHSLFFDEYNFGTTTDANVIFGTDSYLPRIASVNFTADLFGQSVNFFEFTARAEGLEELAANA 733
            :|.|:...    .|....|.:|....:.|||.........|.|.:.:..||..|..|:.|     
Zfish   634 DYYHTPLM----IGAAGSAYMINDAATILPRAIVAKARTYLAGAAADVIEFGVRTGGIHE----- 689

  Fly   734 FGPKGPLSGQLLRKKLSFLNRWLGNESAEEDDTLENLLSLDNLRLKRKAQEQARASEEEVDEDYD 798
                                                            |..::.|::|.||    
Zfish   690 ------------------------------------------------ALLKSSAADESVD---- 702

  Fly   799 FEESLEGNKRQKRDVSTTRKQEIDRNVDSLGYKLKYDYNNPRAQFGLRVFGNDLRYFNVESLVEV 863
                              |..:|.|.:.:|........:.|.|...::|||.::.|.|.:..:..
Zfish   703 ------------------RITKIKRTLKALANWKALPTDRPLASAYVKVFGQEVAYVNFDKTIIE 749

  Fly   864 MALAAKFNPFQQA------KNVLSGKEFTYTKSRVFLDASYTVPLAVGLPLAIH----AFGASSI 918
            .|:.....|..:|      |.:..|..|.|.|..:..:....:|.|||:|:...    |..|:|:
Zfish   750 EAIPMVSGPKPRALLKEALKALQEGVAFQYAKPLLAAEVRRILPTAVGVPMEFSLYTAAVAAASV 814

  Fly   919 DLRV-----------SGNLDEMDPPTDWHFDVEGQFKPSVSVDVITTMQTDMFWEQSGIKVKSNL 972
            :::.           |..||:: ..||..|..|.  :|||::.....|..:..:.|:.:..:..:
Zfish   815 NVQATITPALPEKLESMTLDQL-KRTDVQFQAEA--RPSVALQTFAVMGVNTAFIQAAVMARGKI 876

  Fly   973 YSNSELVAKLKVRGR--------NLVSFSFDLPRDKNEIFSVRSELLVQKREEQLPQAGIANRSA 1029
                ..:|..||..|        .:.:...:||   ..|.|...|.|...|       .|.:.||
Zfish   877 ----RTIAPGKVAARADILKGNYKVETLPVELP---EHIASASFETLA
VVR-------NIEDHSA 927

  Fly  1030 NSTCTWPVLDQAIGLQMCSHYSVPDLSNATEIYPSLLLAGPLNFSLILKKSDLSAKKYVFEYKWD 1094
            ..:.  |::.: :.||.....|..|||.......|:..:.|.:.:|......:..|..|      
Zfish   928 ERSI--PLVPE-LSLQNSQTSSAGDLSTEMSSAASVRASAPFDRTLCYSCPYIQVKGCV------ 983

  Fly  1095 QQEEDNNFSLVFTTPGSKVPRVLVANVTKVPDAFNASVAFVNGPNRVSAGCSYDGNPDFRRLDIY 1159
               |.::::..|..                    |:::.::.|.:......:....|...||:..
Zfish   984 ---EVHSYNAAFIK--------------------NSTLFYIIGQHSAHVAVARAEGPSVERLEFE 1025

  Fly  1160 LDTNGNRSLDLGMELRRHQDFT----AWIYNPRMLLAINGVN--ITGLAGTVKVNEKNGIKQHDV 1218
            :......:..|..::....|.|    |::...|.:|.....|  ::..:.:.:.:..:..:.|..
Zfish  1026 VQVGPRAAERLVKQMNIIDDDTPEGQAFLLKLREILDTEAKNAPVSSESSSSRNSRSSSSRSHST 1090

  Fly  1219 DLSFETKKLQAVIKGNVVQSEITTSTNMTIKYRFQANKIEEINFAGKLVNNGDKSKTEYRGNMKL 1283
            ..|..::            |..::|::|:               :.:|    .|:.|......|.
Zfish  1091 SSSSSSR------------SSSSSSSSMS---------------SSRL----SKTATIIEPFKKF 1124

  Fly  1284 QTSAYPKLNFASESTWLSL------QGHTEGMITYNNAPDYVNPNYTSLVRLIFARSHSEDSFLD 1342
            ....|...:.|::.|....      |...:.....|:.|.         |..|.||:..:|..|.
Zfish  1125 HKDRYLAHHSATKDTSSGSAAASFEQTQKQNRFLGNDLPP---------VFAIIARAVRDDQKLL 1180

  Fly  1343 GTQTRASLELKLPRSKI---------------DYRILVKHKEHIKNGTEHNVIVGLKYTPEKEIT 1392
            |.|..|..:....|.::               |..:|.|||                      :|
Zfish  1181 GYQLAAYFDKPTARVQLIASSIAENDNRKICADGALLSKHK----------------------VT 1223

  Fly  1393 GLFS 1396
            |.||
Zfish  1224 GKFS 1227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ApoltpNP_995670.2 LPD_N 49..633 CDD:214755 112/539 (21%)
DUF1943 665..1012 CDD:286281 69/375 (18%)
DUF1081 1029..1122 CDD:283982 15/92 (16%)
VWD 3741..3908 CDD:295339
C8 3951..4014 CDD:285899
vtg7NP_001096141.1 Vitellogenin_N 24..592 CDD:279663 112/539 (21%)
DUF1943 626..917 CDD:286281 71/382 (19%)
DUF1944 1164..1328 CDD:286284 19/95 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 74 1.000 Domainoid score I9069
eggNOG 1 0.900 - - E1_KOG4338
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23345
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.910

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