Sequence 1: | NP_995670.2 | Gene: | Apoltp / 34283 | FlyBaseID: | FBgn0032136 | Length: | 4333 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_000375.3 | Gene: | APOB / 338 | HGNCID: | 603 | Length: | 4563 | Species: | Homo sapiens |
Alignment Length: | 4921 | Identity: | 960/4921 - (19%) |
---|---|---|---|
Similarity: | 1648/4921 - (33%) | Gaps: | 1594/4921 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 12 LLLLIAHTQAVRENPLKDPRICGRPQCDSKSAKFNYGEQLYKYQYTVAVRTEFAGSGDNSSDLLL 76
Fly 77 KSDLEIFFPKPCEGYLRINDAKLYDTLDEL---NDNESDSSEKTKEYDYYDNLANEESESQNYDN 138
Fly 139 MHPKSSDFNVDLTKNLLRFAFHDGLISEVCPQEQETPWVLNIKKGILSAFQNTMMRFDVDANTTE 203
Fly 204 T-------DVSGQCQVQYALEDTDSSYVT-IRKTKDINSCRQRYATHSVLQTTPYTFRDDKTIWP 260
Fly 261 ILKSQSHCNLTID---NNVYKEIKCLETHLLVPFSNASS-GALTTSTSRLKLDGVESYSAGEFLE 321
Fly 322 QNPELVERRATLVFDHTPAVKP---SHDEIKAARELLVEMCRVGFPNIQREFIDVFTNFLQTSKS 383
Fly 384 LDYK----------------TLSVLLQRSASTCEQGRNHLLESLPFIGSTASYKVMRDQIINEKL 432
Fly 433 TKQMAHDWMTALSFITRPDEETLETFHSILEYAKNRLDAEYTLGAT--AVVHSFCKHHEACEENL 495
Fly 496 RVQQIINLLETEFLNLYNLFKGERRTRERMVILLKGLGNIGVVSSAFAEQLQ----WIIREDEAP 556
Fly 557 VDIRLHGILAFRRVDCA-RHRSYFLDNYGNYTLNSELRIYSYLQAMRCPDYISVGVIKSILEHEE 620
Fly 621 INQVGSFVWSHLTNLAKSNSPVRIEAQGL--LLNDELSER---FKMDIRKFSRNYE--HSLFFDE 678
Fly 679 YN-FGTTTDANVIFGTDSYLPRIASVNFTADLFG-QSVNFFEFTARAEGLEELAANAFGPKG--P 739
Fly 740 LSGQLLRKKLSFLNRWLGNESAEEDDTLENLLSLDNLRLKRKAQEQARASEEEVDEDYDFEESLE 804
Fly 805 GNKRQKRDVSTTRKQEIDRNVDSLGYKLKYDYNNPRAQFGLRVFGNDLRY---FNVESLVEVMAL 866
Fly 867 AAKF---NPFQQAKNVLSGKEFTYTKSRVFLDASYTVPLAVGLPLAIHAFGA------SSIDLRV 922
Fly 923 SGNLDEMDPPTDWHFDVEGQFKPSVSVDVITTMQTDM-FWEQSGIKVKSNLYSNSELVAKLKVRG 986
Fly 987 RNLVSFSFDLPRDKNEIFSVRS----ELLVQKREEQLPQAGIANRSANSTCTWPVLDQAI-GLQM 1046
Fly 1047 CSH--YSVPDLSNATEIYPSLLLAGPLNFSLILKKSDLSAKKYVFEYKWDQQEEDNNFSLVFTTP 1109
Fly 1110 GSKVPRVLVANVTKVPDAFNASVAFVNGPNRVSAGCSYDGN-PDFRRLDIYLDTNGNRSLDLGME 1173
Fly 1174 LRRHQDFTAWIYNPRMLLAINGVNITGLAGTVKVNEKNGIKQHDVDLSFETKKLQAVIKGNV--- 1235
Fly 1236 -----VQSEI----------------TTSTNMTIKYRFQANKIEE-INFAGKLVNNGDKSKTEYR 1278
Fly 1279 GNMKLQTSAYPK------------------LNF--------ASESTWL-----------SLQGHT 1306
Fly 1307 EGMITYN----NAPDYVNPNYTSLVRLIFARSHSEDSFLDGTQTRASLELKLP-----RSKIDYR 1362
Fly 1363 ILVKHKEHIKNGTEHNVIVGLKYTPEKEITGLFSVHLPRRNL----FAIDAYMNVTVPEFNSCTA 1423
Fly 1424 SLKVNEKATKDYIIFINGSWFTGHSVAVKANYKDRSSRVQALHHLK--MIVESPSFNIT-SLNII 1485
Fly 1486 YRRKQLLI----------FYDIQAKYD------QDPY--GLTIQYASNAHNRNTNAEVRLKVKER 1532
Fly 1533 DYWINAKLLSEQPKLLQLEIHMDKIRDVHIQVGLLNVDKRKELSLELKWDANRDPSQRLGLL--- 1594
Fly 1595 --AEYNS---PGT-----KHYDGNLMITYP--------ERTIHFGFNSF-------TGGPKY--- 1631
Fly 1632 --FGKVHASWS-INEVIEFEYEA------------GILPGHTL----------------HNWVKA 1665
Fly 1666 ELRTPFDGWRVNSLDAGIYSLKNLILVNSTLFWADDQKLQVGYKSDYDVNDQLMSFDVRFGINST 1730
Fly 1731 IRDIPTINVKVKHWMDVKKVDTELYLGYSGQN-----DTFNTYSMDSSWEIEK--NQRYNNYSGL 1788
Fly 1789 V--HLVSPFKGYEKGGLVAHFSLSDQRVVSG----AASLNFDLREFTL--TMNGYVKKFTDNMLT 1845
Fly 1846 VNITTPLEKF-----GTINARFGLNEKKRHAVAEVRAPTAALGVEVLADIKNLLNFDVKLSVATP 1905
Fly 1906 IESFQQAAIFALFNPERVDMRGLWNNVTLGFTGVWHMQNITDFEYSYHVFTPLAGFEENG----- 1965
Fly 1966 ------------FIVQ-------------------LLKRKEFVFQLHGKMS-------------- 1985
Fly 1986 -------NY-----------KLGVKINGEPKSDL----------------VNQLGSNKMELEMLY 2016
Fly 2017 DADFKP----LNAETDYKPDAD------------EEYFSYFTNFQVDTLVWPTIVGN---VDIQE 2062
Fly 2063 IIDFY-LVVGHVELPQGKVEFKDRLHYPDYINVHN-----------LLTVTTPFAVAKNIKSIVE 2115
Fly 2116 YHVDLNFNAFYERVK-FIVNDDKDNTQELGFVFNYTALQDNVKPKAHDVQVTLLT----PYEMLH 2175
Fly 2176 EIYVHGHIELDDNAYKGNISAVTAHTHLSMAASIENEDNFLETSVGIQLETDAIPHYGCQVYFKK 2240
Fly 2241 DFSA-------VDKAIDIRFEVTDNGTLNQL--HISTDWHTDPSYIVNANGRIKTTMLPLQMAST 2296
Fly 2297 SVLVIQGQNPHLNFDLNLLSQNGQSIAYGARANK-----KKDVFNI----EVWTPMKNFRNISMH 2352
Fly 2353 GTAIRSPRDPGRYDVSGFLYRNMATYEVTGAVRMTNSLPIDVVLRVQPKAGGRDGVIELN----- 2412
Fly 2413 -------------IHEAGPKKIRFSFSA-IED-GKMCQMSGGYSVSKTNGAMDFSVLVESTEPEI 2462
Fly 2463 ARINFYGNLSPNSEGSLVGDL-SLETPWKALGIDTVHLHSDVGFLNKGGHIVGEYKIGQYIGRGS 2526
Fly 2527 CLWSWILAEDMQ----LVLENYLERPNAKPRIVHASAKYQNP----------------------- 2564
Fly 2565 -GQTFTQLQAGGRLSVDSKWNL---DVNGSAEYKSVDDFKFRV---------ITALPLPVGDRHQ 2616
Fly 2617 LSASYQGNVISQQFNNPDFVLEASYESFEAQNKLLSRISYKNATNNLKGLGHVEWGKIQNLSVVE 2681
Fly 2682 GDFELLHKQGAQREFSAKIITPKFKNEHTFALTGSYDLE---------KSGHHNVVGSLDYPA-S 2736
Fly 2737 RRITDLDVSVSSLSNMHGIFNSTLPTFLNVSWLKTDFNFTTNNGKSYRYCRCFWPQDTAYFKLNS 2801
Fly 2802 NYDSDSSNFNHNLNGNVEIEVPLATRHRADIVYGLQKRR--------NQDAGNVKVVYNEKQVLD 2858
Fly 2859 GKYKRLEQAKAPIYKETTDISLENEVKPLGIHFVSTRDASDP-----AGSQDVKHIEIYELRNTQ 2918
Fly 2919 -------------NFNLTGELHS-RATLKAQDFKVVAIHPNRAVVLSTKYEDVSPEVVRHHS--- 2966
Fly 2967 -KLELSETAWIGYNLELGNFSKVGNESQSFALEIFYPKRNLSSSGQYYMTDTNFNSDLSFQWLGG 3030
Fly 3031 NYDQQPKIIHSNLQWK-AEPLHRGDREHRT-IALTVAHPL----LEKDINCKATYYRGLRDLLRT 3089
Fly 3090 HLTIDYSEYPDQLIELGAQLTDRYSELGHTNYT---FHVYGK---HIASELDVQLNGTL--AAMN 3146
Fly 3147 SYYKT----ESTAHYKRD-----IFPAR----------YGKFL------ALLDVNKRELEYERQS 3186
Fly 3187 PFHA------VRLHL----------------LPTIRYPIYGLNATIWDTPDTNHSGYIYMDILER 3229
Fly 3230 YARMDFNLTEDASQNLQMVGYIPDTRSAFLDIWRNYEEIRVIDVS---SYLKMNHSRLITGRFHW 3291
Fly 3292 RPSIRQEVREKIQAVGKSVYSSFSEGIDFWIKSIYTETTESMGVVWNTAK-EYNRDFIDDIGQLS 3355
Fly 3356 VLEEDLADLRLFVNQSYEANDFYIK------------------------NVVNFTLTILDELAI- 3395
Fly 3396 -----RDHIESLPKIFSELW-------QAMGD--SGKALRNSIVWL------------IETIKTT 3434
Fly 3435 YNNLLDAVARFFHGES-LVYISGL-LEKGIAKYDSFIKDLHIKFIKY-IENLWHKTWTLAENHWK 3496
Fly 3497 AVLKRFEPHL---------------FKMISFIETTAWNLSKEVFDFIYKRTNELAESPYFNKVSS 3546
Fly 3547 FTADAE-----RLYRDFKANDAITNIKKYSTIAWNFVKEKYFKLVPFGAELNEVLTEIWQ-EIKE 3605
Fly 3606 LEKIDQVQIMVQKYYEVMAKVDW---VADELQLEHRLHQVYGLVRNKFRNYAMNALETADMYREA 3667
Fly 3668 KTKFVFDPEVGIIDLEQKLPMSWH---------AFNETPRFEEIP-EYQVLAKAQSFFSETNSSI 3722
Fly 3723 VMKLYNMRTHLD-----------PKTWLPPYYSRAL----------LIDSRHYMTFDQRYVGLNL 3766
Fly 3767 NFDELGNGRSTSQCSYLLAHDF------------------FKRNFTLLLEPASKSLAGQGLTRKL 3813
Fly 3814 SFIANGQLIEI--DLETDHISINGNPQPILP-LKLGDVNIHRDLDVLSITSDTEFSLHCNVQFDL 3875
Fly 3876 CWFEVSGWYFGRTAGLLGTLNNEPYDEYTMSSGVISNETQLFTDSWSLKQCRQNKLAQTQEVSQE 3940
Fly 3941 VSDACTSFFRTGILATCSAVLDPTPFYEMCMDLGMKSPPIRKGHPAVKGACAAALAYIEACTALK 4005
Fly 4006 VPMRVPSQCVFCQLSNGSYVPEGTFMELSGPEIPKSSDVV--FIVEAKECNANLKTS-KNIMTVV 4067
Fly 4068 SSIEEQLQAAKITNNRYAVVAFGGVSPYD-----KARSVIYEHNEFTSKPEQLADYFG------- 4120
Fly 4121 -HINTGNGSSNDILMAISAAAKLNFRPGVSKTFILLSCSKCAARDMRFDYTSILQYLLEEGVNLH 4184
Fly 4185 ILADTEFDFERNKKLRHFF----GLDSKLVYSK---RFPEGDAETR 4223 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Apoltp | NP_995670.2 | LPD_N | 49..633 | CDD:214755 | 124/624 (20%) |
DUF1943 | 665..1012 | CDD:286281 | 77/369 (21%) | ||
DUF1081 | 1029..1122 | CDD:283982 | 21/95 (22%) | ||
VWD | 3741..3908 | CDD:295339 | 41/197 (21%) | ||
C8 | 3951..4014 | CDD:285899 | 12/62 (19%) | ||
APOB | NP_000375.3 | Heparin-binding | 32..126 | 22/125 (18%) | |
Vitellogenin_N | 46..597 | CDD:279663 | 124/627 (20%) | ||
Heparin-binding | 232..306 | 20/79 (25%) | |||
DUF1943 | 632..937 | CDD:337318 | 76/360 (21%) | ||
Heparin-binding | 902..959 | 12/60 (20%) | |||
DUF1081 | 961..1062 | CDD:336410 | 27/121 (22%) | ||
OM_channels | 1448..>1865 | CDD:354832 | 98/474 (21%) | ||
Heparin-binding | 2043..2178 | 31/152 (20%) | |||
235kDa-fam | <2060..>2490 | CDD:130673 | 108/584 (18%) | ||
Heparin-binding | 3161..3236 | 18/95 (19%) | |||
Basic (possible receptor binding region) | 3174..3184 | 3/9 (33%) | |||
LDL receptor binding | 3373..3393 | 4/19 (21%) | |||
Heparin-binding | 3383..3516 | 27/136 (20%) | |||
Basic (possible receptor binding region) | 3386..3394 | 2/7 (29%) | |||
COG1340 | 4258..4523 | CDD:224259 | |||
ApoB100_C | 4494..4550 | CDD:315212 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG4338 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 1 | 0.950 | - | 1 | Normalized mean entropy | S10273 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R7740 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.790 |