Sequence 1: | NP_995670.2 | Gene: | Apoltp / 34283 | FlyBaseID: | FBgn0032136 | Length: | 4333 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001367903.1 | Gene: | vit-3 / 24104675 | WormBaseID: | WBGene00006927 | Length: | 1603 | Species: | Caenorhabditis elegans |
Alignment Length: | 1597 | Identity: | 306/1597 - (19%) |
---|---|---|---|
Similarity: | 568/1597 - (35%) | Gaps: | 470/1597 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 149 DLTKNLLRFAF----HDGLISEVCPQEQETPWVLNIKKGILSAF-------------QNTMMRFD 196
Fly 197 VDA---NTTETDVSGQCQVQYAL--EDTDSSYVTIRKTKDIN--SCRQRYATHSVL--------- 245
Fly 246 ---------QTT-PYTFRDDKTIWPILKSQSHCNLTIDNNVYKEIKCLETHLLVPFSNAS----- 295
Fly 296 ----SG---ALTTSTSRLKLDGVES-YSAGEFLEQNP----ELVERRATL--VF-------DHTP 339
Fly 340 AVKPSHDEIKAARELLVEMCRVGFPNIQREFIDVFTNFLQTSKSLDYKTLSVLLQRSASTCEQGR 404
Fly 405 NHLLESLPFIGSTASYKVMRDQIINEKLTKQMAHDWMTALSFITRPDEETLETFHSILEYAKNRL 469
Fly 470 DAEYT-------LGATAVVHSFCKHHEACEENLRVQQIINLLETEFLNLYNLFKGERRTRER--- 524
Fly 525 --------------MVILLKGLGNIGVVSSAFAEQLQWIIREDEAPVDIRLHGILAFRRVDCARH 575
Fly 576 R---SYFLDNYGNYTLNSELRIYSYLQAMR-CPDYISVGVIKSILEHEEINQVGSFVWSHLTNLA 636
Fly 637 KSNSP----VRIEAQGLLLNDELSERFKMDIRKFSRNYEHSLFFDEYNFGTTTDANVIFGTDSYL 697
Fly 698 PRIASVNFTADLFGQSVN--FFEFTARAEGLEELAANAFGPKGPLSGQLLRKKLSFLNRWLGNES 760
Fly 761 AEEDDTLENLLSLDNLRLKRKAQEQARASEEEVDEDYDFEESLEGNKRQKRDVSTTRKQEIDRNV 825
Fly 826 DSLGYKLKY---DYNNPRAQFGLRVFGNDLRYFNVESLVEVMALAAKFNPFQQAKNVLSGKEFTY 887
Fly 888 TKSRVFLDASYTVPLAVGLPLAIHA--------FGASSIDLRVSGNLDEMDPPTDWHFDVEGQFK 944
Fly 945 PSVSVDVITTMQTDMFWE---QSGIK--VKSNLYSNSELVAKLKVRGRNL-VSFSFDLPRDKNEI 1003
Fly 1004 FSVRS-----------------------------ELLVQKREEQLPQAGI-ANRSANSTCTWPVL 1038
Fly 1039 DQAIGLQMCSHYSVPDLSNATEIYPSLLLAGPLNFSLILKKSDLSAKKY--VFEYKWD-QQEEDN 1100
Fly 1101 NFSLVFTTPGSKVPRVLVANVTKVPDAFNASVAFVNGPNRVSAGCSYDGNPDFRRL-DIYLDTNG 1164
Fly 1165 NRSLDLGMELRR----HQDFTAWIYNPRMLLAINGVNITGLAGTVKVNEKNGIKQ------HDVD 1219
Fly 1220 LSFETKKLQAVIKGNVVQSEITTSTNMTIKYRFQANKIEEINFAGKLVNNGDKSKTEYRG----N 1280
Fly 1281 MKLQTSAYPKLNFASESTWLSLQGHTEGMITYNNAPDYVNP-NYTSLVRLIFARSHSEDSFLDGT 1344
Fly 1345 QTRASLELKL-PRSKIDYRILVKHKEHIKNGTEHNVIVGLKYTPEKEITGLFSVHLPRRNLFAID 1408
Fly 1409 AYMNVTVP------------EFNSCTASLKVNEKATKDYIIFINGSWFTGHSVAVKANYKDRSSR 1461
Fly 1462 VQALHHLKMIVESPSFNITSLNIIYRRKQLLIFY-----DIQAKYDQDPYGLTIQYASNAHNRNT 1521
Fly 1522 NAEVRLKVKERDYWINAKLLSEQPKLLQL---EIHMD 1555 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Apoltp | NP_995670.2 | LPD_N | 49..633 | CDD:214755 | 126/580 (22%) |
DUF1943 | 665..1012 | CDD:286281 | 71/394 (18%) | ||
DUF1081 | 1029..1122 | CDD:283982 | 16/95 (17%) | ||
VWD | 3741..3908 | CDD:295339 | |||
C8 | 3951..4014 | CDD:285899 | |||
vit-3 | NP_001367903.1 | Vitellogenin_N | 24..617 | CDD:396081 | 126/580 (22%) |
DUF1943 | 651..936 | CDD:401204 | 69/357 (19%) | ||
VWD | 1300..1454 | CDD:214566 | 27/149 (18%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 50 | 1.000 | Domainoid score | I7810 |
eggNOG | 1 | 0.900 | - | - | E1_KOG4338 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | LDO | PTHR23345 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.910 |