Sequence 1: | NP_995670.2 | Gene: | Apoltp / 34283 | FlyBaseID: | FBgn0032136 | Length: | 4333 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038941012.1 | Gene: | Ccnf / 117524 | RGDID: | 67401 | Length: | 818 | Species: | Rattus norvegicus |
Alignment Length: | 675 | Identity: | 139/675 - (20%) |
---|---|---|---|
Similarity: | 214/675 - (31%) | Gaps: | 240/675 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 2915 RNTQNFNLTGEL--HSRATLKAQDFKVV-AIH-------PNRAVV-LSTKYEDVSPEVVRHHSKL 2968
Fly 2969 ELSETAWIGYNLELGNFS---KVG-----NESQSFALEIFYPKRNLSSSGQYYMTD-TNFNSDLS 3024
Fly 3025 FQWLGGNYDQQP---------KIIHSNLQ--------WKAEPLH--------RGDREHRTIALTV 3064
Fly 3065 AHPLLEKDIN--CKATYYRGLRDLLRTHLTIDYSEYPDQLIELGAQLTDRYSELGHTNYTFHVYG 3127
Fly 3128 KHIASELDVQLNGTLAAMNSYYKTESTAHYKRDIFPARYGKFLALLDVNKRELEYERQSPFHAVR 3192
Fly 3193 LHLLPTIRYPIYGLNATIWDTPDTNHSGYIYMDILERYARM-DF-----NLTEDASQNLQMVGYI 3251
Fly 3252 PDTRSAFLDIWRNYEEIRVIDVSSYLKMNHSRLITGRFHWRPSIRQEVREKIQAVGKS---VYSS 3313
Fly 3314 FSEGIDFWIKSIYTETTESMGVVWNTAKEYN-RDFIDDIGQ-LSVLEEDLADLRLFVNQSYEAND 3376
Fly 3377 FYIKNVVNFTLTILDELAIRDHIESLPKIFSELWQAMGDSGKALRNSIVWLIETIKTTY--NNLL 3439
Fly 3440 DA---VARFFHGESLVYISGLLEKGIAKYDSF---IKDLHIKFIKYIENLWHKTWTLAENHWK-- 3496
Fly 3497 ---AVLKRFEPHLFKMISFIETTAW 3518 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Apoltp | NP_995670.2 | LPD_N | 49..633 | CDD:214755 | |
DUF1943 | 665..1012 | CDD:286281 | |||
DUF1081 | 1029..1122 | CDD:283982 | |||
VWD | 3741..3908 | CDD:295339 | |||
C8 | 3951..4014 | CDD:285899 | |||
Ccnf | XP_038941012.1 | FBOX | 73..111 | CDD:197608 | 9/37 (24%) |
CYCLIN_CCNF_rpt1 | 345..439 | CDD:410225 | 31/170 (18%) | ||
CYCLIN_CCNF_rpt2 | 467..578 | CDD:410226 | 27/131 (21%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | mtm9078 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.000 |