DRSC/TRiP Functional Genomics Resources

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Protein Alignment Apoltp and vtga2

DIOPT Version :9

Sequence 1:NP_995670.2 Gene:Apoltp / 34283 FlyBaseID:FBgn0032136 Length:4333 Species:Drosophila melanogaster
Sequence 2:XP_002931744.3 Gene:vtga2 / 100485207 XenbaseID:XB-GENE-5791429 Length:1802 Species:Xenopus tropicalis


Alignment Length:2018 Identity:379/2018 - (18%)
Similarity:689/2018 - (34%) Gaps:579/2018 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LLLLIAHTQAVRENPLKDPRICGRPQCDSKSAKFNYGEQLYKYQYTVAVRTEFAGSGDNSSDLLL 76
            |||.:|.::.....|:..         :||::.:|         |...:...|..||.:.:.:.:
 Frog     8 LLLALAGSERTHIEPVFS---------ESKASVYN---------YEAVILNGFPESGLSRAGIKI 54

  Fly    77 KSDLEIFFPKPCEGYLRINDAKLYDTLDELNDNESDSSEKTKEYDYYDNLANEESESQNYDNMHP 141
            ...:||                            |..::::    |:..:  :..|.:.|:.:.|
 Frog    55 NCKVEI----------------------------SAFAQRS----YFIKI--QSPEIKEYNGVWP 85

  Fly   142 K-----SSDFNVDLTKNL---LRFAFHDGLISEVCPQEQETPWVLNIKKGILSAFQNTMMRFDVD 198
            |     ||.....|...|   .||.:..|.:.::...:..:...:||.:|||:..|.|:.:....
 Frog    86 KDPFTRSSKLTQALADQLTKPARFEYSYGRVGDIFVPDDVSDTAVNIYRGILNLLQLTLKKSQNV 150

  Fly   199 ANTTETDVSGQCQVQYAL-EDTDSSYVTIRKTKDINSCRQRYA----------THSVLQ------ 246
            .:..|:.|.|.|..:|.: ||.....:.|.|..|.|:|:::.:          .||..|      
 Frog   151 YDLQESSVGGICHTRYVIQEDRRGDRINIIKATDFNNCQEKVSKSFGFELSDFCHSCKQMNRNLR 215

  Fly   247 -TTPYTFRDDKTIWPILKSQSHCNLTIDNNVYKEIKCLETHLLVPFSNASSGALTTSTSRLKLDG 310
             ...||::        ||::.      ...|..|:...:.....|| |..:|| .|..:|..|..
 Frog   216 GAATYTYK--------LKARD------QGTVIMEVTARQVIQFTPF-NERNGA-ATMEARQVLAW 264

  Fly   311 VESYSAGEFLEQNPELVE--RRATLVFDHTPAVKPSHD------EIKAARELLVEMCRVGFPNIQ 367
            |.|.|.    :.||..::  .|..|   |......||.      :.|:.....||:.:....:.|
 Frog   265 VGSKSG----QMNPPQIQLKNRGNL---HYQFASESHQMPIHLIKTKSPEAQAVEVLQHLIQDTQ 322

  Fly   368 REFID----VFTNFLQTSKSLDYKTLSVLLQRSASTCEQGRNHLLESLPFIGSTASYKVMRDQII 428
            ::..:    .|...:|..::.|::.:..|.::.|.. .|.|..||.::|..|:....|:::..|.
 Frog   323 QQIREDAPAKFLQLIQLLRASDFENIQALWKQFAQR-TQYRRWLLNAIPMAGTVDCLKLIKQLIH 386

  Fly   429 NEKLTKQMAHDWMTALSFITRPDEETLETFHSILEYAK-NRLDAEY---TLGATAVVHSFCKHHE 489
            ||:||.|.|...:|......||.:...:.....::.:| .:.|..|   .|....:|..:|....
 Frog   387 NEELTPQEAAVIVTFAMRSARPSQRAFQFSADFVQDSKVQKYDVVYKAALLSYGTMVKKYCDQLS 451

  Fly   490 ACEENLRVQQIINLLETEFLNLYNLFKGERRTRERMVILLKGLGNIG--------------VVSS 540
            :|..  :..:.::.|..|..|     ||.   .|.:.:.||.|||.|              :.||
 Frog   452 SCPN--QALEPLHELAAEAAN-----KGH---AEDIALALKALGNAGQPESIKQIQKFLPAITSS 506

  Fly   541 AFAEQLQWIIREDEAPVDIRLHGILAFRRV---DCARHRSYFLDNYGNYTLNSELRIYSYLQAMR 602
            |:           :.||.|:...::|.|.:   :..:.:...|..:.:....:|:|:.:.|....
 Frog   507 AY-----------QLPVRIQTDAVMALRNIAKQEPRKVQEILLQIFMDRDARTEVRMMACLALFE 560

  Fly   603 C-PDYISVGVIKSILEHEEIN--QVGSFVWSHLTNLAKSN----SPVRIEAQGLLLN------DE 654
            . |...:|..|.::...|...  |:.||.:|.:..||||.    .|: ..|.|:.|.      |.
 Frog   561 TKPGLATVTAIANVAARESKTNLQLASFTYSQMKALAKSRVAQLEPL-AAACGVALKILNPSLDN 624

  Fly   655 LSERFK--MDIRKFSRNYEHSLFFDEYNFGTTTDANVIFGT------DSYLPRIASVNFTADLFG 711
            |..|:.  |.:..|..|....:   ...|.....||.:|..      ..|...:.|.|       
 Frog   625 LGYRYSKVMRVDTFKYNLMAGV---AAKFYVMNSANTMFPVFILAKLREYTSAVESDN------- 679

  Fly   712 QSVNFFEFTARAEGLEEL--AANAFGPKGPLSGQLLRKKLSFLNRWLGNESAEEDDTLENLLSLD 774
                 .|...|.||:||.  ..|......|     :|||:|.|              ::.||...
 Frog   680 -----IEIGIRGEGIEEFLRKQNTQFADFP-----MRKKISQL--------------VKTLLGFK 720

  Fly   775 NLRLKRKAQEQARASEEEVDEDYDFEESLEGNKRQKRDVSTTRKQEIDRNVDSLGYKLKYDYNNP 839
            .|           .|:..:...|   ..|||             |||                 .
 Frog   721 GL-----------PSQVPLLSGY---VKLEG-------------QEI-----------------A 741

  Fly   840 RAQFGLRVFGNDLRYFNVESLVEVMALAAKFNPFQQAKN-VLSGKEFTYTKSRVFLDASYTVPLA 903
            .:|....|..|..|..|..        |.:....:...| :|:|....|.::.:..:..:.:|..
 Frog   742 FSQLNKEVIQNIFRALNEP--------AERHTMIRNVLNKLLNGVVGQYAQAWMSWEYRHIIPTT 798

  Fly   904 VGLPLAIHAFGASSIDLRVSGNLD-EMDPPTDW--------HFDVEGQFKPSVSVDVITTMQTDM 959
            ||||..|..:.::.::..|:.::. :.:|..|:        ...:.||.|||:.||.:.|:..:.
 Frog   799 VGLPAEISLYQSAIVNAGVNSDMKVKPNPSGDFSAAQLLESQIQLNGQVKPSIRVDTVATIGINS 863

  Fly   960 FWEQSGIKVKSNLYSN--SELVAKLKVRGRN-------------LVSF---SFDLPRDKNEIFSV 1006
            ...|:||:....::::  ::..|.|.::.||             ||.|   :|...|:..::.:.
 Frog   864 RLLQAGIEFHGKMHAHLPAKFTAYLDMKERNFKIETPPCQQEDHLVQFRAQTFAFTRNIADLDAA 928

  Fly  1007 RSELLVQKREEQLPQAGIANRSANSTCTWPVLDQAIGLQMCS----------------HYSVPDL 1055
            |..|:|.:..||    .|..:...||..    ..|.|..|..                |.:.|..
 Frog   929 RKTLVVPRNSEQ----NILKKHFESTGR----ASAEGASMMEDSSEMGPRKYSTEPGPHQNAPAN 985

  Fly  1056 SNATEIYPSLLLAGPLNFSLILKKSDLSAKKYVFEYKWDQQEEDNNFSLVFTTPGSK-VPRVLVA 1119
            .|:.:.......|| :||.:..|..:.:|.:..|.|   |...::.|........|: ....|..
 Frog   986 VNSYDACTKFSKAG-VNFCIQCKTHNAAAHRNTFLY---QAVGEHEFKFTMKPAHSEGAIEKLQL 1046

  Fly  1120 NVTKVPDAFNASVAFVNGPNRVSAGCSYDGNPDFRRLDIYLDTNGNRSLDLGMELRRHQDFTAWI 1184
            .:|..|.|    .:.:.|...|.                  ||...:..|..::.|.        
 Frog  1047 EITAGPQA----ASKIKGLVEVK------------------DTEDEQMDDSAVQKRL-------- 1081

  Fly  1185 YNPRMLLAINGVNITGLAGTV----KVNEKNGIKQH----DVDLSFETKKLQAVIKGNVVQSEIT 1241
               :|:|.|:. :|....||.    |.:.||  |:|    |.::..|.||.|:....:...|..:
 Frog  1082 ---KMILGIDD-SIKDTNGTAVLRSKQSRKN--KKHKRPLDAEVVAEAKKPQSSSSSSSSSSSSS 1140

  Fly  1242 TSTNMTIKYRFQANKIEEINFAGKLVNNGDKS-KTEYRGNMKLQTSAYPKLNFASESTWLSLQGH 1305
            :|::.:    ..::.....:.:....:...:| :.|:..:.:.|.|:........::.|...:.|
 Frog  1141 SSSSSS----SSSSSSSSSSSSSSSSSYSQRSRRREHHPHQQRQPSSSSSQEKDKKNNWQENRKH 1201

  Fly  1306 TEGMITYNNAPDYVNPNYTSLVRLIFARSHSEDSFLDGTQTRASLELKLPRSKIDYRILVKH--- 1367
            .:      .|....:.:.:|      :.|.|..|....:.:.:|.|.:..|::       :|   
 Frog  1202 GQ------KAQSSSSSSSSS------SSSSSSSSSSSSSSSSSSNENRRHRNR-------QHDNE 1247

  Fly  1368 ---KEHIKNGTEHNVIVGLKYT------PEKEITGLFSVHLPRRNLFAIDAYMNVTVPEFNSCTA 1423
               |:|.:|...::.......:      .:|.....:.:|..|                    .|
 Frog  1248 QAKKQHEQNKNRYSSSSSSSSSSSSSEMQKKHHRNFYDLHFRR--------------------AA 1292

  Fly  1424 SLKVNEKATKDYIIFINGSWFTGHSVAVKANYKDRSSRVQALHHLKMIVE-SPSFNITSLNIIYR 1487
            ..|..||..        .|.....|.:.::.|.:|       |..|.:.: .|...:.:...:..
 Frog  1293 RTKDTEKRA--------SSSSESSSSSSESAYANR-------HKAKFLGDKQPPVLVVTFKAVRN 1342

  Fly  1488 RK-----QLLIFYDIQAKYDQ-DPYGLTI---QYAS-------NAHNRNTNAEVRLKVKE--RDY 1534
            ..     |::::.|..:...| ..|.:.|   ::|:       |.|    .|:..||..:  :||
 Frog  1343 DNTKQGYQMVVYQDYHSSKQQIQAYVMDISKTRWAACLDAVVVNPH----EAQASLKWGQNCQDY 1403

  Fly  1535 WINAKL----LSEQPKLLQLEIHMDKIRD---------VHIQVGLLNVDKRKELSLELKWDANRD 1586
            .||.|.    ...|| .|::..:..||..         .|...|.:.:       |..:.:..|:
 Frog  1404 KINFKAETGNFGNQP-ALKVTANWPKIPSKWKSTGKAVAHYVPGGMYM-------LGFQGEYRRN 1460

  Fly  1587 PSQRLGLLAEYNSPGTKHYDGNLMITYPERTIHF-----------------------GFNSFTGG 1628
            ..:::.|:...:||.|    .:::|..|..|:::                       .:|.|...
 Frog  1461 SQRQVKLVFALSSPRT----CDVVIQMPRLTVYYRTMRLPVPIPVGHHAKENVLQTPTWNIFAEA 1521

  Fly  1629 PKYFGKVHASWSINEVIEFEYEAGILPGHTLHNWVKAELRTPFDGWRVNSLDAGIYSLKNLILVN 1693
            |:.         :.:.|:.|.:.| ....|..|.:......|.:.:.|.:.|.. :.||.::|:.
 Frog  1522 PQI---------VMDSIQGECKVG-QDQITTFNGIDLASALPENCYHVLAQDCS-HELKFMVLMR 1575

  Fly  1694 ST--------------------LFWADDQKLQVG----------YKS-DY-------DVNDQLMS 1720
            ::                    .:.||..|:::.          ||| ||       :.|..|:|
 Frog  1576 NSKESPNHKAFNVKLGAYDIDMYYSADSLKMKINGIELSEERLPYKSFDYPTVEIKKEGNGVLLS 1640

  Fly  1721 FDVRFGINSTIRDIPTINVKVKHWMDVKKVDTELYLGYSGQND--------------TFNTYSMD 1771
            .. .:||:....|..|:.::...||..|.      .|..|.||              ..:|.|..
 Frog  1641 AP-EYGIDFINYDGLTLKMRPALWMKGKT------CGICGHNDDESEKEFQMPDGSMAKDTMSFI 1698

  Fly  1772 SSW 1774
            .||
 Frog  1699 HSW 1701

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ApoltpNP_995670.2 LPD_N 49..633 CDD:214755 130/645 (20%)
DUF1943 665..1012 CDD:286281 74/382 (19%)
DUF1081 1029..1122 CDD:283982 20/109 (18%)
VWD 3741..3908 CDD:295339
C8 3951..4014 CDD:285899
vtga2XP_002931744.3 Vitellogenin_N 24..594 CDD:396081 133/666 (20%)
DUF1943 628..911 CDD:401204 71/368 (19%)
DUF1944 1331..1496 CDD:401207 32/180 (18%)
VWD 1525..1688 CDD:214566 33/171 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR23345
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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