DRSC/TRiP Functional Genomics Resources

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Protein Alignment GlcAT-S and b3gat2

DIOPT Version :9

Sequence 1:NP_001162922.1 Gene:GlcAT-S / 34282 FlyBaseID:FBgn0032135 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_001025524.1 Gene:b3gat2 / 594928 XenbaseID:XB-GENE-921701 Length:331 Species:Xenopus tropicalis


Alignment Length:339 Identity:118/339 - (34%)
Similarity:164/339 - (48%) Gaps:60/339 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 RNPGEEEFPGNLSHRAQEIYEYEWNFKIEEQTTKQMQIRNRHRFDPRIH----SMNFRPLNETVH 183
            |:||....|      ....|.| ||.::     .:..:......||..|    |...|..|||| 
 Frog    29 RSPGSGRVP------TARYYPY-WNRRV-----GRAALMKPPPSDPSTHQELLSATQRRKNETV- 80

  Fly   184 ICSESYEDRRQFMQDKPQSDYVQLPVIYFVTPTYPRREQIPELTRLAHTLLHIPRLHWLVADDQE 248
                                    ||||.:||||.|..|..||||||:|...:|||||:|.:|..
 Frog    81 ------------------------PVIYAITPTYSRPVQKAELTRLANTFRQVPRLHWIVVEDSV 121

  Fly   249 KCNDYMDTLLYRFGMPFTHMVSPMPSKFRNEKPAPRGVANRRAALQWIRQH-----------NLT 302
            ...:.:...|...|:..||:..|.|.::: ....||....|.|.|.|:||.           ...
 Frog   122 HPTELVSRFLAGAGVTSTHLYVPTPRRYK-RTGLPRATEQRNAGLAWLRQEYQRPGLRTAQPQDP 185

  Fly   303 NGILYFGDDDNTYDLRLFSEIRKTQRVSMFPVGLIADYGVSGPVVRKGKVVAFLDSWVAGRRWPV 367
            .|:::|.||||||.|.||.|:|.||:||::||||:.......|||..||||::...|.|.|.:.:
 Frog   186 TGVVFFADDDNTYSLELFQEMRTTQKVSVWPVGLVGGRRYERPVVENGKVVSWYTGWRADRPFAI 250

  Fly   368 DMAGFAVNLEYMAQYP---YVNMPYKPGYEEDLFLRSIGLQMNLIEPRGNNCTEILVWHTQTKSK 429
            |||||||:|:.:...|   :.....:||.:|..||:.| .::|.:||:.||||::|||||:|:..
 Frog   251 DMAGFAVSLQVILSSPKAVFKRRGSQPGMQESDFLKQI-TKVNELEPKANNCTKVLVWHTRTEKV 314

  Fly   430 KLGMVRLESKYLDD 443
            .|..   |.|:..|
 Frog   315 NLAN---EPKHPQD 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlcAT-SNP_001162922.1 GlcAT-I 208..427 CDD:132995 96/232 (41%)
b3gat2NP_001025524.1 GlcAT-I 81..313 CDD:132995 97/233 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D385244at33208
OrthoFinder 1 1.000 - - FOG0000504
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10896
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X314
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.110

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