DRSC/TRiP Functional Genomics Resources

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Protein Alignment GlcAT-S and b3gat3

DIOPT Version :9

Sequence 1:NP_001162922.1 Gene:GlcAT-S / 34282 FlyBaseID:FBgn0032135 Length:486 Species:Drosophila melanogaster
Sequence 2:XP_012809781.2 Gene:b3gat3 / 594895 XenbaseID:XB-GENE-1010243 Length:310 Species:Xenopus tropicalis


Alignment Length:246 Identity:104/246 - (42%)
Similarity:152/246 - (61%) Gaps:16/246 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   197 QDKPQSDYVQLPVIYFVTPTYPRREQIPELTRLAHTLLHIPRLHWLVADDQEKCNDYMDTLLYRF 261
            :|.|:.|:  |||||.|||||.|..|..|||||:.|||.||.|||::.:|..:.:..:..||.:.
 Frog    51 RDLPEDDH--LPVIYVVTPTYARPHQRAELTRLSQTLLLIPSLHWILVEDSAERSKSVADLLAQS 113

  Fly   262 GMPFTHM--VSPMPSKFRNEKP---APRGVANRRAALQWIRQHNLTN--GILYFGDDDNTYDLRL 319
            |:.:||:  .:|...|.::..|   .||||..|..||:|::.:....  |::||.||||||.:|:
 Frog   114 GLHYTHLNVQTPPVMKLKDSDPNWLKPRGVEQRNEALRWLKLNKSPKDFGVVYFADDDNTYSVRI 178

  Fly   320 FSEIRKTQRVSMFPVGLIADYGVSGPVVRKGKVVAFLDSWVAGRRWPVDMAGFAVNLEYMAQYPY 384
            |.|:|.||:||::||||:......||.|.||.|:.|..:|...|.:|:|||||||:|..:..:|.
 Frog   179 FQEMRYTQKVSVWPVGLVGGLRYEGPRVEKGHVIGFHTAWKPHRPFPIDMAGFAVSLSLLLSHPE 243

  Fly   385 VNMPYKPGYEEDLFLRS--IGLQMNL--IEPRGNNCTEILVWHTQTKSKKL 431
            ..  :.|..|.. ||.|  :|..:::  :|||.:|||::.||||:|:..||
 Frog   244 AR--FDPNAERG-FLESSLLGQLVSIGDLEPRAHNCTKVWVWHTRTEKPKL 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlcAT-SNP_001162922.1 GlcAT-I 208..427 CDD:132995 97/229 (42%)
b3gat3XP_012809781.2 GlcAT-I 60..288 CDD:132995 98/230 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D385244at33208
OrthoFinder 1 1.000 - - FOG0000504
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10896
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X314
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.110

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