DRSC/TRiP Functional Genomics Resources

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Protein Alignment GlcAT-S and B3gat3

DIOPT Version :10

Sequence 1:NP_001162922.1 Gene:GlcAT-S / 34282 FlyBaseID:FBgn0032135 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_001121656.1 Gene:B3gat3 / 293722 RGDID:1311968 Length:335 Species:Rattus norvegicus


Alignment Length:246 Identity:99/246 - (40%)
Similarity:136/246 - (55%) Gaps:24/246 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   207 LPVIYFVTPTYPRREQIPELTRLAHTLLHIPRLHWLVADDQEKCNDYMDTLLYRFGMPFTHM--V 269
            ||.||.:||||.|..|..||.||:.||..:||||||:.:|.|.....:..||...|:.|||:  :
  Rat    74 LPTIYVITPTYARLVQKAELVRLSQTLSLVPRLHWLLVEDAESPTPLVSGLLAASGLLFTHLAVL 138

  Fly   270 SPMPSKFRNEKPA---PRGVANRRAALQWIRQHN------------LTNGILYFGDDDNTYDLRL 319
            :|...:.|..:|.   ||||..|..||.|:|...            .|.|::||.||||||...|
  Rat   139 TPKAQRLREGEPGWVRPRGVEQRNKALDWLRGKGGAVGGEKDSPPPGTQGVVYFADDDNTYSREL 203

  Fly   320 FSEIRKTQRVSMFPVGLIADYGVSGPVVRKGKVVAFLDSWVAGRRWPVDMAGFAVNLEYMAQYPY 384
            |.|:|.|:.||::||||:......||.|:.|:||.|..:|...|.:|:|||||||:|..:...| 
  Rat   204 FKEMRWTRGVSVWPVGLVGGLRFEGPRVQDGRVVGFHTAWEPNRPFPLDMAGFAVSLPLLLAKP- 267

  Fly   385 VNMPYKP----GYEEDLFLRSIGLQMNLIEPRGNNCTEILVWHTQTKSKKL 431
             |..:..    |:.|...|..: :....:|||..|||::|||||:|:..|:
  Rat   268 -NAQFDATAPRGHLESSLLSHL-VDPKDLEPRAANCTQVLVWHTRTEKPKM 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlcAT-SNP_001162922.1 GlcAT-I 208..427 CDD:132995 96/239 (40%)
B3gat3NP_001121656.1 GlcAT-I 75..313 CDD:132995 97/240 (40%)

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