DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GlcAT-S and glct-5

DIOPT Version :9

Sequence 1:NP_001162922.1 Gene:GlcAT-S / 34282 FlyBaseID:FBgn0032135 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_493160.2 Gene:glct-5 / 183771 WormBaseID:WBGene00008293 Length:304 Species:Caenorhabditis elegans


Alignment Length:255 Identity:86/255 - (33%)
Similarity:131/255 - (51%) Gaps:25/255 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   193 RQFMQDKPQSDYVQLPVIYFVTPTYPRREQIPELTRLAHTLLHIPRLHWLVADDQEKCNDYMDTL 257
            |:.|:...::.......|..|||||.|..::|::.|||:||.|:..|||:|.:|.......:..|
 Worm    43 RKIMEPSSKNSDASNRTIIVVTPTYKRITRLPDMIRLANTLAHVKNLHWIVVEDGYGIVPAVREL 107

  Fly   258 LYRFGMPFTHMVSPMPSKFRNEKPAP-RGVANRRAALQWI--------RQHNLTNGILYFGDDDN 313
            |.:..:.:|:|.      .:..|..| ||...|..||::|        |:|   :.::||.||||
 Worm   108 LEKTNLSYTYMA------HKTAKGYPTRGWYQRTMALRYIRSSWSKILREH---DAVVYFADDDN 163

  Fly   314 TYDLRLFSE-IRKTQRVSMFPVGLIADYGVSGPVVRKGKVVAFLDSWVAGRRWPVDMAGFAVNLE 377
            .||:|||:: ||....:.::.|||:....|..|.|...||..|...|...||:.|||||||:||:
 Worm   164 AYDVRLFTDYIRNVNTLGVWAVGLVGGAIVEAPKVVNHKVTGFNVRWSPNRRFAVDMAGFAINLK 228

  Fly   378 YMAQYPYV---NMPYKPGYEEDLFLRSIGLQMNLIEPRGNNCT---EILVWHTQTKSKKL 431
            |:.....|   :.....|..|...:..|||.:..|:|.|.:.|   :|:||||:|...::
 Worm   229 YILNSDAVFGKDCKRGEGAPETCLIEDIGLDLEDIKPFGYDATKVQDIMVWHTKTSPPEI 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlcAT-SNP_001162922.1 GlcAT-I 208..427 CDD:132995 83/234 (35%)
glct-5NP_493160.2 GlcAT-I 58..285 CDD:132995 84/235 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1476
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S3762
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D385244at33208
OrthoFinder 1 1.000 - - FOG0000504
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10896
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X314
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
98.830

Return to query results.
Submit another query.