DRSC/TRiP Functional Genomics Resources

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Protein Alignment GlcAT-S and b3gat1b

DIOPT Version :9

Sequence 1:NP_001162922.1 Gene:GlcAT-S / 34282 FlyBaseID:FBgn0032135 Length:486 Species:Drosophila melanogaster
Sequence 2:XP_002663665.1 Gene:b3gat1b / 100332644 ZFINID:ZDB-GENE-131101-1 Length:336 Species:Danio rerio


Alignment Length:279 Identity:101/279 - (36%)
Similarity:156/279 - (55%) Gaps:26/279 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   169 RIHSMNFR---P-LNETVHICSESYEDRRQFMQDKPQSDYVQLPVIYFVTPTYPRREQIPELTRL 229
            :.|..:||   | |:|..||...:   |.:.:..:..:....||.::.:||||.|..|..|||||
Zfish    45 KAHQRSFRLQKPCLSENKHIPEVT---RMKSIHSRSPAWSNALPTLHIITPTYSRPVQKAELTRL 106

  Fly   230 AHTLLHIPRLHWLVADDQEKCNDYMDTLLYRFGMPFTHMVSPMP-------SKFRNEKPAPRGVA 287
            |:||||:|.||||:.:|..:....:..||....:.:||:....|       :||||.: .|||..
Zfish   107 ANTLLHVPNLHWLLVEDSAQKTPLVSRLLENSRLNYTHLNVETPPNLKVQRTKFRNAR-IPRGTM 170

  Fly   288 NRRAALQWIRQHNL-----TNGILYFGDDDNTYDLRLFSEIRKTQRVSMFPVGLIADYGVSGPVV 347
            .|..||:|:|. |:     .:|::||.||||||.|.||.|:|.|.:.|::||..:.......|.:
Zfish   171 QRNLALRWLRA-NIGPRLGQSGVVYFADDDNTYSLELFEEMRWTHKASVWPVAFVGGLRYESPKI 234

  Fly   348 R-KGKVVAFLDSWVAGRRWPVDMAGFAVNLEYMAQYP--YVNMP-YKPGYEEDLFLRSIGLQMNL 408
            . :|||..:...:...|.:.:|||||||||:.:...|  |..:. .|.||:|...|:.: :.::.
Zfish   235 NSQGKVSGWRTVFDPRRPFAIDMAGFAVNLQLILSKPQAYFKLKGVKGGYQESSLLQDL-VTLSD 298

  Fly   409 IEPRGNNCTEILVWHTQTK 427
            :||:.:|||::|||||:|:
Zfish   299 LEPKADNCTKVLVWHTRTE 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlcAT-SNP_001162922.1 GlcAT-I 208..427 CDD:132995 90/234 (38%)
b3gat1bXP_002663665.1 Glyco_transf_43 106..315 CDD:281369 78/211 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D385244at33208
OrthoFinder 1 1.000 - - FOG0000504
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10896
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X314
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
55.020

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