DRSC/TRiP Functional Genomics Resources

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Protein Alignment GlcAT-S and b3gat1

DIOPT Version :9

Sequence 1:NP_001162922.1 Gene:GlcAT-S / 34282 FlyBaseID:FBgn0032135 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_001090809.1 Gene:b3gat1 / 100037907 XenbaseID:XB-GENE-961613 Length:347 Species:Xenopus tropicalis


Alignment Length:278 Identity:101/278 - (36%)
Similarity:155/278 - (55%) Gaps:23/278 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   167 DPRIHSMNFRPLNETVHICSESYEDRRQFMQDKPQSDYVQLPVIYFVTPTYPRREQIPELTRLAH 231
            |.|.:..:.|.:.|.|         |.:::..:|......||:|:.:||||.|..|..|||||::
 Frog    65 DSREYCSSDRDIVEVV---------RTEYVYTRPPPWMGNLPIIHVITPTYSRPVQKAELTRLSN 120

  Fly   232 TLLHIPRLHWLVADDQEKCNDYMDTLLYRFGMPFTHMVSPMPSKFR-----NEKPAPRGVANRRA 291
            ||||:|.|||::.:|.::....:..||...|:.:||:....|..::     .:...|||...|..
 Frog   121 TLLHVPNLHWILVEDSQRRTPLVTRLLQDSGLNYTHLNVETPRNYKLRGDTRDPRIPRGTMQRNL 185

  Fly   292 ALQWIRQ----HNLTNGILYFGDDDNTYDLRLFSEIRKTQRVSMFPVGLIADYGVSGPVVR-KGK 351
            ||:|:|:    :|...|::||.||||||.|.||.|:|.|::||::||..:.......|.|. .||
 Frog   186 ALRWLRETFNRNNSLPGVVYFADDDNTYSLDLFEEMRSTRKVSVWPVAFVGGLRYESPKVNAAGK 250

  Fly   352 VVAFLDSWVAGRRWPVDMAGFAVNLEYMAQYP--YVNM-PYKPGYEEDLFLRSIGLQMNLIEPRG 413
            |..:...:...|.:.:||||||:||..:.|.|  |..: ..|.||:|...||.: :.:|.:||:.
 Frog   251 VFGWKTVFDPHRPFAIDMAGFAINLRLILQRPQAYFKLRGVKGGYQESSLLREL-VTLNDLEPKA 314

  Fly   414 NNCTEILVWHTQTKSKKL 431
            :|||:||||||:|:...|
 Frog   315 DNCTKILVWHTRTEKPVL 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlcAT-SNP_001162922.1 GlcAT-I 208..427 CDD:132995 91/231 (39%)
b3gat1NP_001090809.1 GlcAT-I 97..329 CDD:132995 92/232 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D385244at33208
OrthoFinder 1 1.000 - - FOG0000504
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X314
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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