DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Trx-2 and TRX2

DIOPT Version :9

Sequence 1:NP_523526.1 Gene:Trx-2 / 34281 FlyBaseID:FBgn0040070 Length:106 Species:Drosophila melanogaster
Sequence 2:NP_198811.1 Gene:TRX2 / 833992 AraportID:AT5G39950 Length:133 Species:Arabidopsis thaliana


Alignment Length:83 Identity:40/83 - (48%)
Similarity:58/83 - (69%) Gaps:1/83 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 KASGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDECEDIAMEYNISSMPTFVFL 81
            |.|.||:|:||.|:|||||:||.|.:..::.:|.| |..:|:||||..|:|.|:|:::|||||.:
plant    44 KESNKLLVVDFSASWCGPCRMIEPAIHAMADKFND-VDFVKLDVDELPDVAKEFNVTAMPTFVLV 107

  Fly    82 KNGVKVEEFAGANAKRLE 99
            |.|.::|...||....||
plant   108 KRGKEIERIIGAKKDELE 125

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trx-2NP_523526.1 TRX_family 18..103 CDD:239245 39/82 (48%)
TRX2NP_198811.1 TRX_family 39..128 CDD:239245 40/83 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 89 1.000 Domainoid score I2685
eggNOG 1 0.900 - - E2759_KOG0907
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H128202
Inparanoid 1 1.050 94 1.000 Inparanoid score I2234
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1482186at2759
OrthoFinder 1 1.000 - - FOG0000170
OrthoInspector 1 1.000 - - mtm998
orthoMCL 1 0.900 - - OOG6_100096
Panther 1 1.100 - - O PTHR10438
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X356
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.830

Return to query results.
Submit another query.