DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Trx-2 and TRXF2

DIOPT Version :9

Sequence 1:NP_523526.1 Gene:Trx-2 / 34281 FlyBaseID:FBgn0040070 Length:106 Species:Drosophila melanogaster
Sequence 2:NP_197144.1 Gene:TRXF2 / 831501 AraportID:AT5G16400 Length:185 Species:Arabidopsis thaliana


Alignment Length:92 Identity:40/92 - (43%)
Similarity:60/92 - (65%) Gaps:6/92 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LTKASG-KLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVD-ECEDIAMEYNISSMPT 77
            :.||:| |:||||.:..||||||:|:||..|||.::.| :|.||:|.: :.:.:|.|..|..:||
plant    91 IVKAAGDKIVVLDMYTQWCGPCKVIAPKYKELSEKYQD-MVFLKLDCNQDNKPLAKELGIRVVPT 154

  Fly    78 FVFLKNGVKVEEFAGANAKRLEDVIKA 104
            |..||:...|:|..||   :.||::.|
plant   155 FKILKDNKVVKEVTGA---KYEDLLAA 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trx-2NP_523526.1 TRX_family 18..103 CDD:239245 38/86 (44%)
TRXF2NP_197144.1 TRX_family 86..180 CDD:239245 40/92 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0907
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1482186at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10438
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.880

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