DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Trx-2 and ACHT1

DIOPT Version :9

Sequence 1:NP_523526.1 Gene:Trx-2 / 34281 FlyBaseID:FBgn0040070 Length:106 Species:Drosophila melanogaster
Sequence 2:NP_194346.1 Gene:ACHT1 / 828722 AraportID:AT4G26160 Length:221 Species:Arabidopsis thaliana


Alignment Length:92 Identity:31/92 - (33%)
Similarity:54/92 - (58%) Gaps:4/92 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDECEDIAMEYNISSMPTFV 79
            |..|..:||::||:.||||.|:.:.|||.:.:.:. .|::.|||:.||.:.:....|:..:|.|.
plant   108 LKDAGDRLVIVDFYGTWCGSCRAMFPKLCKTAKEH-PNILFLKVNFDENKSLCKSLNVKVLPYFH 171

  Fly    80 FLKNG-VKVEEFAGANAK--RLEDVIK 103
            |.:.. .:||.|:.:.||  :|.:.|:
plant   172 FYRGADGQVESFSCSLAKFQKLREAIE 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trx-2NP_523526.1 TRX_family 18..103 CDD:239245 29/87 (33%)
ACHT1NP_194346.1 TRX_family 102..198 CDD:239245 30/90 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0907
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1482186at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.780

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