DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Trx-2 and ATHM2

DIOPT Version :9

Sequence 1:NP_523526.1 Gene:Trx-2 / 34281 FlyBaseID:FBgn0040070 Length:106 Species:Drosophila melanogaster
Sequence 2:NP_192261.1 Gene:ATHM2 / 825653 AraportID:AT4G03520 Length:186 Species:Arabidopsis thaliana


Alignment Length:93 Identity:33/93 - (35%)
Similarity:52/93 - (55%) Gaps:1/93 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 QVKDKADLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDECEDIAM 68
            ||.:.:..|..:.||:|. ||:||:|.||||||||.|.:.:|:..:...:...|::.||..:...
plant    83 QVVNDSTWDSLVLKATGP-VVVDFWAPWCGPCKMIDPLVNDLAQHYTGKIKFYKLNTDESPNTPG 146

  Fly    69 EYNISSMPTFVFLKNGVKVEEFAGANAK 96
            :|.:.|:||.:....|.|.:...||..|
plant   147 QYGVRSIPTIMIFVGGEKKDTIIGAVPK 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trx-2NP_523526.1 TRX_family 18..103 CDD:239245 29/79 (37%)
ATHM2NP_192261.1 thioredoxin 85..185 CDD:200072 31/91 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1482186at2759
OrthoFinder 1 1.000 - - FOG0000170
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100096
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.780

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