DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trx-2 and AT3G56420

DIOPT Version :9

Sequence 1:NP_523526.1 Gene:Trx-2 / 34281 FlyBaseID:FBgn0040070 Length:106 Species:Drosophila melanogaster
Sequence 2:NP_001325846.1 Gene:AT3G56420 / 824809 AraportID:AT3G56420 Length:154 Species:Arabidopsis thaliana


Alignment Length:88 Identity:31/88 - (35%)
Similarity:60/88 - (68%) Gaps:3/88 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 QLTKAS--GKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDECEDIAMEYNISSMP 76
            ::|:|:  ||::|::|.|.||.|||.|.|...:|:::: .:::.:.|||:|..:.:.|:|:.:.|
plant    54 KITEANNHGKILVVNFSAPWCVPCKKIEPVFRDLASRY-PSMIFVTVDVEELAEFSNEWNVEATP 117

  Fly    77 TFVFLKNGVKVEEFAGANAKRLE 99
            |.||||:|.::::..||....|:
plant   118 TVVFLKDGRQMDKLVGAETSELQ 140

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trx-2NP_523526.1 TRX_family 18..103 CDD:239245 30/84 (36%)
AT3G56420NP_001325846.1 TRX_family 49..142 CDD:239245 31/88 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0907
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1482186at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10438
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X356
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
87.880

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