DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Trx-2 and TRX1

DIOPT Version :9

Sequence 1:NP_523526.1 Gene:Trx-2 / 34281 FlyBaseID:FBgn0040070 Length:106 Species:Drosophila melanogaster
Sequence 2:NP_190672.1 Gene:TRX1 / 824267 AraportID:AT3G51030 Length:114 Species:Arabidopsis thaliana


Alignment Length:95 Identity:41/95 - (43%)
Similarity:61/95 - (64%) Gaps:3/95 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 QLTKA--SGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDECEDIAMEYNISSMP 76
            ||.||  |..|||:||.|:|||||:.|:|...:|:.:. .||:.||||.||.:.:|.::.|.:||
plant    20 QLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKL-PNVLFLKVDTDELKSVASDWAIQAMP 83

  Fly    77 TFVFLKNGVKVEEFAGANAKRLEDVIKANI 106
            ||:|||.|..:::..||....|:..|..::
plant    84 TFMFLKEGKILDKVVGAKKDELQSTIAKHL 113

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trx-2NP_523526.1 TRX_family 18..103 CDD:239245 37/86 (43%)
TRX1NP_190672.1 TRX_family 19..110 CDD:239245 40/90 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 89 1.000 Domainoid score I2685
eggNOG 1 0.900 - - E2759_KOG0907
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 94 1.000 Inparanoid score I2234
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1482186at2759
OrthoFinder 1 1.000 - - FOG0000170
OrthoInspector 1 1.000 - - mtm998
orthoMCL 1 0.900 - - OOG6_100096
Panther 1 1.100 - - O PTHR10438
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X356
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.830

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